Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0192 |
Symbol | |
ID | 6519524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 202000 |
End bp | 202770 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642745360 |
Product | ABC transporter permease |
Protein accession | YP_002113192 |
Protein GI | 194734862 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.201983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.333926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCAGC TTTACTGGGT TGCCCTTAAA AGCATCTGGG CGAAAGAGAT CCACCGCTTT ATGCGGATCT GGGTGCAAAC GCTAGTGCCG CCTGTCATCA CGATGACGCT CTATTTTATT ATTTTCGGTA ACCTGATCGG TTCGCGCATC GGCGAAATGC ATGGTTTTAG CTATATGCAA TTTATTGTGC CGGGCCTGAT TATGATGGCG GTTATTACTA ACTCCTACGC GAATGTCGCG TCGTCATTTT TTAGCGCCAA GTTTCAGCGC AATATTGAGG AACTGCTGGT CGCGCCGGTA CCAACGCACG TGATTATCGC CGGATTTGTC GGCGGCGGCG TGGCGCGCGG GCTGTGCGTG GGGATTCTGG TGACGGCGAT TTCGCTCTTT TTTGTGCCTT TCCAGGTGCA TTCCTGGGTA TTTGTCGCGC TAACGCTGAT TCTGACCGCG ATTCTGTTCT CGCTGGCCGG ACTGCTGAAC GCCGTGTTTG CGAAAACCTT TGACGATATC AGCCTGATCC CGACCTTTGT GCTGACGCCG CTGACCTACC TCGGCGGGGT ATTTTACTCG CTGACGCTGC TGCCGCCGTT CTGGCAAGGG TTGTCGCACC TGAACCCGAT CGTCTACATG ATCAGCGGCT TCCGTTATGG TTTCCTGGGT ATCCATGATG TGCCGCTGGT CACCACATTT GGCGTACTGG TGATCTTTAT CGCCGCTTTC TACCTGCTGT GCTGGTCGCT GATCCAGCGT GGGCGCGGTT TGCGCAGTTA A
|
Protein sequence | MMQLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GEMHGFSYMQ FIVPGLIMMA VITNSYANVA SSFFSAKFQR NIEELLVAPV PTHVIIAGFV GGGVARGLCV GILVTAISLF FVPFQVHSWV FVALTLILTA ILFSLAGLLN AVFAKTFDDI SLIPTFVLTP LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG IHDVPLVTTF GVLVIFIAAF YLLCWSLIQR GRGLRS
|
| |