Gene SeSA_A0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0192 
Symbol 
ID6519524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp202000 
End bp202770 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content54% 
IMG OID642745360 
ProductABC transporter permease 
Protein accessionYP_002113192 
Protein GI194734862 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.201983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.333926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGC TTTACTGGGT TGCCCTTAAA AGCATCTGGG CGAAAGAGAT CCACCGCTTT 
ATGCGGATCT GGGTGCAAAC GCTAGTGCCG CCTGTCATCA CGATGACGCT CTATTTTATT
ATTTTCGGTA ACCTGATCGG TTCGCGCATC GGCGAAATGC ATGGTTTTAG CTATATGCAA
TTTATTGTGC CGGGCCTGAT TATGATGGCG GTTATTACTA ACTCCTACGC GAATGTCGCG
TCGTCATTTT TTAGCGCCAA GTTTCAGCGC AATATTGAGG AACTGCTGGT CGCGCCGGTA
CCAACGCACG TGATTATCGC CGGATTTGTC GGCGGCGGCG TGGCGCGCGG GCTGTGCGTG
GGGATTCTGG TGACGGCGAT TTCGCTCTTT TTTGTGCCTT TCCAGGTGCA TTCCTGGGTA
TTTGTCGCGC TAACGCTGAT TCTGACCGCG ATTCTGTTCT CGCTGGCCGG ACTGCTGAAC
GCCGTGTTTG CGAAAACCTT TGACGATATC AGCCTGATCC CGACCTTTGT GCTGACGCCG
CTGACCTACC TCGGCGGGGT ATTTTACTCG CTGACGCTGC TGCCGCCGTT CTGGCAAGGG
TTGTCGCACC TGAACCCGAT CGTCTACATG ATCAGCGGCT TCCGTTATGG TTTCCTGGGT
ATCCATGATG TGCCGCTGGT CACCACATTT GGCGTACTGG TGATCTTTAT CGCCGCTTTC
TACCTGCTGT GCTGGTCGCT GATCCAGCGT GGGCGCGGTT TGCGCAGTTA A
 
Protein sequence
MMQLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GEMHGFSYMQ 
FIVPGLIMMA VITNSYANVA SSFFSAKFQR NIEELLVAPV PTHVIIAGFV GGGVARGLCV
GILVTAISLF FVPFQVHSWV FVALTLILTA ILFSLAGLLN AVFAKTFDDI SLIPTFVLTP
LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG IHDVPLVTTF GVLVIFIAAF
YLLCWSLIQR GRGLRS