| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0188 |
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| Symbol | gcd |
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| ID | 6516951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 197116 |
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| End bp | 199506 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642745356 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_002113188 |
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| Protein GI | 194736062 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.683326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA ATAACGCACG ATCGCCACGA TTACTCGTGA CGCTGACGGC CCTCTTTGCA
GCGCTTTGTG GGCTGTATCT TCTTATCGGA GGTGTCTGGC TGGTTGCTAT TGGCGGTTCC
TGGTACTACC CCATCGCGGG CCTCGTGATG CTGGTTGTGG CCGGATTGCT ATGGCGCAGT
AAACGTGCCG CGCTGTGGCT GTATGCCGCC TTGCTGCTGG CGACAATGAT TTGGGGCGTA
TGGGAAGTCG GGTTCGACTT CTGGGCGCTC ACGCCGCGTA GCGATATCCT GGTGTTTTTC
GGCATCTGGC TAATATTGCC GTTTGTCTGG CATCGGCTGG TGGTTCCTTC CAGCGGCGCT
GTGGCGGCGC TGGTCGTGGC GCTGCTGATT AGCGGCGGCA TTCTGACCTG GGCTGGCTTC
AACGACCCGC AGGAGATCAA CGGTACGCTT CGCGCCGACG CCACGCCCGC CGCAACAAGC
TCGTCGATCG CCGACGAAGA CTGGCCGGCC TATGGACGTA ATCAGGAAGG CCAACGCTAT
TCACCGCTGA AACAGATCAC TGCGGATAAC GTTCACCAAC TGAAAGAAGC GTGGGTCTTC
CGCACCGGCG ATCTGAAACA ACCCAACGAT CCGGGCGAAA TCACCAACGA AGTGACCCCG
ATTAAAGTCG GCGATACGCT CTACCTGTGT ACGGCTCACC AGCGTCTGTT CGCACTGGAC
GCCGCCAGCG GTAAAGAGAA GTGGCATTTT GATCCTCAGT TGAAGACCGA TTCGTCTTTC
CAGCATGTGA CCTGCCGCGG CGTCTCTTAT CATGAGGCCA AAGCGGATAC CGCCTCGCCG
GAGGTCATCG CCGACTGTCC GCGCCGCATT ATCCTCCCGG TCAATGACGG TCGCCTTTTC
GCGGTGAATG CCGAAACCGG CAAGCTGTGT GAAACCTTCG CCAATAAAGG CGTCCTGAAT
CTGCAAACCA ATATGCCGGA CACCACGCCG GGACTGTATG AACCGACGTC GCCGCCGATT
ATCACCGATA AAACGATCGT CATTGCCGGT TCGGTCACGG ATAACTTCTC TACCCGCGAA
ACGTCCGGCG TTATCCGTGG TTTTGACGTT AATACCGGTA AGCTACTGTG GGCCTTCGAT
CCGGGGGCGA AAGATCCGAA CGCGATTCCA GCCGATGAGC ACGCTTTTAC CTTTAACTCG
CCGAACTCCT GGGCGCCTGC CGCCTATGAT GCGAAACTGG ATCTGGTCTA TCTGCCGATG
GGCGTGACCA CGCCGGATAT CTGGGGCGGT AACCGCACGC CGGAGCAGGA ACGTTATGCC
AGCTCCATCC TGGCGCTGAA TGCCACCACC GGGAAACTGG CCTGGAGTTA TCAGACCGTC
CATCACGATC TGTGGGATAT GGACCTGCCG GCACAGCCGA CGCTGGCGGA TATCACCGTT
AACGGTACCA CCGTTCCGGT TATCTATGCG CCAGCGAAAA CCGGTAATAT CTTTGTGCTC
GACAGACGTA ATGGCGAGCT GGTCGTGCCC GCTCCGGAAA AACCGGTCCC ACAGGGCGCG
GCAAAAGGCG ATTACGTCGC CAAAACTCAG CCGTTCTCTG ATTTAACCTT CCGCCCGAAA
AAAGATCTCT CCGGCGCGGA TATGTGGGGC GCGACCATGT TCGACCAACT GGTGTGCCGC
GTTATGTTCC ACCAGTTGCG CTATGAAGGT ATCTTCACTC CACCGTCCGA GCAGGGGACA
TTGGTATTCC CTGGCAACCT GGGGATGTTT GAATGGGGCG GTATTTCCGT CGATCCAGAC
CGTCAGGTCG CTATCGCTAA CCCGATGGCG CTGCCGTTTG TCTCGAAGCT GATCCCACGC
GGCCCTGGCA ATCCGATGGA GCCGCCGAAA GACGCGAAAG GTACCGGAAC AGAAGCGGGT
ATTCAGCCAC AGTACGGCGT ACCGTTCGGC GTCACGCTGA ATCCGTTCCT TTCGCCGTTT
GGCCTGCCGT GTAAACAACC GGCCTGGGGC TATATTTCCG CGTTGGATCT GAAGACCAAT
GAAATCGTAT GGAAGAAACG TATAGGGACG CCGCGCGACA GTATGCCGTT CCCGATGCCG
GTTCCGGTGC CGTTCAACAT GGGGATGCCC ATGCTCGGCG GGCCAATCTC AACCGCCGGT
AACGTACTGT TCATTGCCGC GACCGCCGAC AACTACCTGC GCGCTTATAA CATGAGCAAC
GGGGAAAAAC TGTGGCAGGG ACGTTTACCC GCCGGAGGCC AGGCAACGCC GATGACCTAT
GAGGTAAACG GTAAGCAGTA CGTGGTCGTT TCTGCCGGAG GCCACGGTTC GTTTGGTACG
AAGATGGGCG ACTATATCGT GGCCTATGCT TTGCCTGACG ACGCGAAATA A
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| Protein sequence | MAENNARSPR LLVTLTALFA ALCGLYLLIG GVWLVAIGGS WYYPIAGLVM LVVAGLLWRS
KRAALWLYAA LLLATMIWGV WEVGFDFWAL TPRSDILVFF GIWLILPFVW HRLVVPSSGA
VAALVVALLI SGGILTWAGF NDPQEINGTL RADATPAATS SSIADEDWPA YGRNQEGQRY
SPLKQITADN VHQLKEAWVF RTGDLKQPND PGEITNEVTP IKVGDTLYLC TAHQRLFALD
AASGKEKWHF DPQLKTDSSF QHVTCRGVSY HEAKADTASP EVIADCPRRI ILPVNDGRLF
AVNAETGKLC ETFANKGVLN LQTNMPDTTP GLYEPTSPPI ITDKTIVIAG SVTDNFSTRE
TSGVIRGFDV NTGKLLWAFD PGAKDPNAIP ADEHAFTFNS PNSWAPAAYD AKLDLVYLPM
GVTTPDIWGG NRTPEQERYA SSILALNATT GKLAWSYQTV HHDLWDMDLP AQPTLADITV
NGTTVPVIYA PAKTGNIFVL DRRNGELVVP APEKPVPQGA AKGDYVAKTQ PFSDLTFRPK
KDLSGADMWG ATMFDQLVCR VMFHQLRYEG IFTPPSEQGT LVFPGNLGMF EWGGISVDPD
RQVAIANPMA LPFVSKLIPR GPGNPMEPPK DAKGTGTEAG IQPQYGVPFG VTLNPFLSPF
GLPCKQPAWG YISALDLKTN EIVWKKRIGT PRDSMPFPMP VPVPFNMGMP MLGGPISTAG
NVLFIAATAD NYLRAYNMSN GEKLWQGRLP AGGQATPMTY EVNGKQYVVV SAGGHGSFGT
KMGDYIVAYA LPDDAK
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