Gene SeSA_A0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0185 
SymbolspeE 
ID6515453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp193912 
End bp194772 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content54% 
IMG OID642745353 
Productspermidine synthase 
Protein accessionYP_002113185 
Protein GI194735446 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.506874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA ATACGATGTG GCATGAAACG CTACACGACC AGTTTGGTCA GTACTTTGCC 
GTAGACAACG TTCTGTATCA TGAAAAAACC GATCACCAGG ATTTAATCAT CTTTGAAAAC 
GCCGCTTTTG GCCGCGTGAT GGCGCTGGAC GGCGTGGTAC AGACCACCGA ACGCGACGAG 
TTTATTTATC ATGAAATGAT GACCCACGTC CCGCTGCTGG CGCACGGTCA TGCGAAACAC 
GTTCTGATTA TCGGCGGCGG CGACGGCGCA ATGCTACGTG AAGTTACCCG GCATAAAAAC 
GTCGAAACCA TCACCATGGT GGAGATAGAC GCTGGCGTAG TCTCGTTTTG CCGCCAGTAT 
TTACCCAACC ACAATGCCGG CAGCTACGAC GATCCGCGCT TTACGCTGGT GATCGACGAC 
GGCGTGAATT TCGTCAATCA GACCCATCAG ACCTTTGATG TGATCATTTC CGACTGTACC 
GATCCGATAG GCCCCGGCGA AAGCCTGTTT ACCTCCGCCT TTTATGAAGG CTGTAAGCGT 
TGCCTGAATC CGGGCGGCAT TTTTGTCGCC CAGAACGGCG TGTGCTTCCT GCAACAGGAT 
GAAGCGCTCG ATAGCCACCG CAAGCTGAGT CATTACTTCA GCGATGTCGG CTTCTACCAG 
GCGGCGATTC CGACCTATTA CGGCGGCATT ATGACCTTCG CCTGGGCGAC GGACAACGAC 
GCTCTTCGTC ACCTGTCGAG CGAAATTATT CAGGCGCGTT TTCATGCCGC CGGCCTCAAA 
TGTCGCTATT ACAACCCGGC TATTCATGTC GCTGCATTTG CGCTACCGCA ATATCTACAC 
GACGCACTGT CCGCACAGTG A
 
Protein sequence
MAENTMWHET LHDQFGQYFA VDNVLYHEKT DHQDLIIFEN AAFGRVMALD GVVQTTERDE 
FIYHEMMTHV PLLAHGHAKH VLIIGGGDGA MLREVTRHKN VETITMVEID AGVVSFCRQY 
LPNHNAGSYD DPRFTLVIDD GVNFVNQTHQ TFDVIISDCT DPIGPGESLF TSAFYEGCKR 
CLNPGGIFVA QNGVCFLQQD EALDSHRKLS HYFSDVGFYQ AAIPTYYGGI MTFAWATDND 
ALRHLSSEII QARFHAAGLK CRYYNPAIHV AAFALPQYLH DALSAQ