Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0183 |
Symbol | |
ID | 6519278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 192300 |
End bp | 193067 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642745351 |
Product | DeoR-family transcriptional regulator |
Protein accession | YP_002113183 |
Protein GI | 194738300 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.341023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAC AACACCGTCT GGATCTCATT GTGGCGTATC TGAAAAACCA TACGCTGGTT ACGGTAGAAC AGCTGGTTGA GGCGGTTGAC GCATCACCAG CCACTATCCG TCGCGATTTG ATCAAGCTGG ATGAGCAGGG TGTGATCAGC CGTAGTCATG GCGGCGTGGC GCTGCGGCGT TTTGAACCCG CCCAGCCCAC CACCAATGAA AAACAACTGC GATCGCCTGC TGAAAAACGG GCGATCGCAC GCGTTGCCGC ATCGCTGGTG AATGCTGGCG ATGCCGTCGT GCTGGATGCA GGTACGACAA TGATGGAGCT GGCGAAATGC TTAACCCATC TTCCGCTGCG GGTCATCACC GTCGATCTGC ATATTGCGCT GTTTTTAGCT GAGTTCCGGC AAATTGAAGT GACGATTGTC GGCGGTCGTA TCGATGACAG CAGTCAGTCC TGTATCGGTG AGCATGGGCG TAAGCTGTTG CGTAGCGTGT ATCCGAACAT CGCGTTTATG AGCTGTAATT CATGGGAGGT AAAAACGGGC GTGACGACCC CAACGGAAGA TAAGGCCGGG CTTAAACAGG AGATTATTGC TAATGCGCAG CGCAAAGTGT TGCTGGCGGA CAGCAGTAAG TATGGCGCGC ATTCGCTCTT TAATGTGGTG CCGCTTGAGC GCTTTAATGA TGTGATTACC GACGTCAATC TGCCGCCGTC AGCGCAGGTT GAACTGAAAG GGCGCGCTTT TGCGCTAACG CTGGTGCAGC CGGAGTGA
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Protein sequence | MKGQHRLDLI VAYLKNHTLV TVEQLVEAVD ASPATIRRDL IKLDEQGVIS RSHGGVALRR FEPAQPTTNE KQLRSPAEKR AIARVAASLV NAGDAVVLDA GTTMMELAKC LTHLPLRVIT VDLHIALFLA EFRQIEVTIV GGRIDDSSQS CIGEHGRKLL RSVYPNIAFM SCNSWEVKTG VTTPTEDKAG LKQEIIANAQ RKVLLADSSK YGAHSLFNVV PLERFNDVIT DVNLPPSAQV ELKGRAFALT LVQPE
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