Gene SeSA_A0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0167 
Symbol 
ID6519792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp171697 
End bp173103 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content51% 
IMG OID642745334 
ProductNa+/galactoside symporter 
Protein accessionYP_002113166 
Protein GI194735199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID[TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.774115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG GCAGACTTTC GGTAAGAGAG AAAATCGGGT ATGGCATGGG TGACGCCGGA 
TGTAACATTA TTTTTGGCGC TATCATGCTG TTTGTTAATT ATTTTTATAC GGATATTTTT
GGTCTTGCCC CGGCGTTAGT CGGTGTTTTA CTCCTTTCAG TACGCGTTAT CGATGCCGTT
ACCGATCCGG TGATGGGCGC GCTTGCCGAT CGTACCCAAA GTAAATATGG TCGTTTCCGC
CCCTGGCTAC TGTGGATTGC ATTTCCCTAC GCGCTGTTCA GCGTGCTGAT GTTCACGACG
CCGGACTGGG GCTATAACAG CAAAGTTGTC TATGCTTTCG TCACCTATTT TCTGCTTTCC
GTGACCTACA CCGCCATCAA TATTCCCTAT TGCTCACTGG GCGGCGTGAT CACCAACGAT
CCAAAAGAGC GCGTGGCCTG TCAGGCTTAT CGCTTCGTGT TAGTCGGCAT CGCGACGCTG
TTGTTATCGT TAACGCTATT GCCGATGGTG GACTGGTTTG GCGGCGGCGA CAAAGCCAAA
GGCTATCAGT TGGCGATGAC CGTGCTGGCG ATTATCGGCA TGGGTATGTT TCTGTTCTGC
TTTGCCAGCG TCCGCGAACG CGTTCGCCCT GCCGTTCCGA CGCACGATGA TATGAAGAAT
GATTTCAAAG ACGTGTGGAA AAACGATCAG TGGGTACGCA TTCTGCTATT GACCTTATGT
AACGTCTGCC CAGGGTTTAT CCGTATGGCG GCGACCATGT ATTACGTCAC CTGGGTGATG
GGACAAAGCA CCCATTTCGC TACGCTTTTT ATTAGCCTTG GCGTGGTCGG TATGATGATC
GGCAGTATGC TGGCAAAAGT CTTAACCGAT CGCTGGTGTA AATTGAAGGT ATTTTTCTGG
ACCAATATCG CGCTGGCGAT TTTCTCCTGC GCGTTCTATT TCTTTGATCC GAAAGCTACC
GTGATGATAG TGGCGCTCTA CTTCCTGCTC AATATTCTGC ATCAGATCCC TTCCCCGTTG
CACTGGTCGC TGATGGCGGA CGTCGATGAT TACGGCGAAT GGAAAACCGG CAAACGCATT
ACCGGTATTA GCTTCTCCGG TAATCTGTTC TTCCTGAAAC TGGGCCTGGC GATTGCCGGG
GCGATGGTCG GCTTTTTGCT CTCCTGGTAC GGTTATGACG CCAGCGCCAA AGCGCAAAGC
GCCTCGGCGA TGAACGGTAT TATGCTGTTG TTTACCGTTA TCCCCGGCGT TGGCTATCTG
ATTACCGCAG GCATGGTACG TCTGCTGAAA GTTGACCGTG AACTGATGAA AAAAATCCAG
GACGATTTGG AAAAACGTCG CACTAATTAC CGCGAATTGA GTGAGTTGCA GGAGCTCAAA
GCCGCTGAAA GCGTAAGGAA AGCCTGA
 
Protein sequence
MDKGRLSVRE KIGYGMGDAG CNIIFGAIML FVNYFYTDIF GLAPALVGVL LLSVRVIDAV 
TDPVMGALAD RTQSKYGRFR PWLLWIAFPY ALFSVLMFTT PDWGYNSKVV YAFVTYFLLS
VTYTAINIPY CSLGGVITND PKERVACQAY RFVLVGIATL LLSLTLLPMV DWFGGGDKAK
GYQLAMTVLA IIGMGMFLFC FASVRERVRP AVPTHDDMKN DFKDVWKNDQ WVRILLLTLC
NVCPGFIRMA ATMYYVTWVM GQSTHFATLF ISLGVVGMMI GSMLAKVLTD RWCKLKVFFW
TNIALAIFSC AFYFFDPKAT VMIVALYFLL NILHQIPSPL HWSLMADVDD YGEWKTGKRI
TGISFSGNLF FLKLGLAIAG AMVGFLLSWY GYDASAKAQS ASAMNGIMLL FTVIPGVGYL
ITAGMVRLLK VDRELMKKIQ DDLEKRRTNY RELSELQELK AAESVRKA