Gene SeSA_A0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0160 
Symbol 
ID6516545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp166206 
End bp167591 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content55% 
IMG OID642745328 
Producthypothetical protein 
Protein accessionYP_002113160 
Protein GI194734628 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG CTCAGCTCAA CACATTGTGT CAACGTCATC AGGCTGTACT GATCAATAGC 
GCCAGCAACA GTATCACTGT TGCGGTGGTC GACGCGCCCT CTCATGCGTT ACTGGACGCT
CTGCATTTCG CCACGCAAAA ACAGATTGAT ATTGTGTGCT GGACTCGCCA GCAAATGGAA
AATCATCGGC ATAAGCCGGA TCAGGCTCCC TCGGCAAACG CCGCGAAAGG CGGAGAAACC
GCGGCCCAGC TTCTCAATCA GACATTACGC TCGGCGATGG AGAAACGCGC CTCTGATATC
CATCTCGAAC CAGGCGCCAG CCGCTACCGA ATAAGACTCC GCATCGACGG CGTTCTTCAT
ATTCTGCAGG ACATCGCCAA AGAGACGGGG CTTGCGCTGA CGGCCAGATT GAAAGTCCTG
GGAAATTTGG ACATCGCTGA ACATCGGCTG CCGCAGGACG GGCAATTTAC CGTTGACCTG
GCGGGCGACA GCATCTCTTT TCGTATCGCC ACGCTTCCCT GTAAAGAAGG CGAAAAAGTC
GTCTTACGGT TGTTGCATCA GGTTGAACAA ACGCTGGATC TGGACACGCT GGGCATGTAC
GGGGCACAAC TTACCGCTTT TAGACAAGCC CTACAGCAAC CTCAGGGGCT GGTACTGGTG
ACTGGCCCCA CCGGTAGCGG AAAAACAGTC ACGCTATACA GCGCGCTACA AACCCGGAAT
ATGCCGGGTA TCAACCTCTG TAGCGTTGAG GATCCGATAG AAATTCCACT GGATGGGATT
AACCAAACGC AGATCCATCC CCGCGCCGGG CTCACCTTTC AAAATGTGCT GCGCGCGCTT
TTACGCCAGG ATCCTGACAT CATCATGGTA GGTGAAATTC GTGACGGCGA CACCGCAGAA
ATCGCCATTA AGGCGGCACA AACGGGCCAT CTGGTACTTT CCACGCTCCA TACGAACTCC
ACCAGCGAAA CCCTGATACG TTTACAACAA ATGGGCGTAG CACGCTGGAT GATCTCATCG
GCGCTTACGC TGGTGGTAGC GCAACGCCTG GTAAGGAAGC TTTGCCCGCA CTGCAAACAG
CGCCTGAGCG ATCCCGTGGT GCTATCGCCC AATCTTTGGC CCAGCGCGCT ACCGCGCTGG
CAGGCAAGCG GCTGTCAGCA TTGCTACCAC GGCTTTTATG GCCGAACCGC GTTATTCGAA
GTGTTAACCG TTACCCCGAC ATTACGTCAG TTAATTGCGA GCGGCGCATC GGCACAAGCA
CTGGAAGCCC ACCTCCAACA GACCGGTACA GGGACGCTTT TTGAAAATGG CTGTCGCGCC
GTTGAGCAAG GCATGACGTC CTTTGAAGAG ATACTGCGCG TTCTGGGAAT GCCCCATGAG
CGTTAA
 
Protein sequence
MKDAQLNTLC QRHQAVLINS ASNSITVAVV DAPSHALLDA LHFATQKQID IVCWTRQQME 
NHRHKPDQAP SANAAKGGET AAQLLNQTLR SAMEKRASDI HLEPGASRYR IRLRIDGVLH
ILQDIAKETG LALTARLKVL GNLDIAEHRL PQDGQFTVDL AGDSISFRIA TLPCKEGEKV
VLRLLHQVEQ TLDLDTLGMY GAQLTAFRQA LQQPQGLVLV TGPTGSGKTV TLYSALQTRN
MPGINLCSVE DPIEIPLDGI NQTQIHPRAG LTFQNVLRAL LRQDPDIIMV GEIRDGDTAE
IAIKAAQTGH LVLSTLHTNS TSETLIRLQQ MGVARWMISS ALTLVVAQRL VRKLCPHCKQ
RLSDPVVLSP NLWPSALPRW QASGCQHCYH GFYGRTALFE VLTVTPTLRQ LIASGASAQA
LEAHLQQTGT GTLFENGCRA VEQGMTSFEE ILRVLGMPHE R