Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0159 |
Symbol | |
ID | 6515333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 165014 |
End bp | 166216 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642745327 |
Product | type IV pilin biogenesis protein |
Protein accession | YP_002113159 |
Protein GI | 194735161 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTA AACAGCTCTG GCGCTGGCAA GGCGTTAACG ATAAAGGTCA ACTGGAACAA GGCGTTGTAT GGGTGGACAA TCGTCTGGCG CTGATCATCA CCCTGCAACA TCAGCGCATT ATGCCGCTTC GCATCAAGCG CATGGGCGTT AACGCCGCAC TGTGGAAAGA AGAGCAAAGC GCTGAAATTA TTCATCAGTT GGCCACGCTC ATTCATGCCG GACTGACGCT TTCTGAAGGG CTGGAACTCC TTGCGCAACA GCATCCCCAC CGACAATGGC AAGCGCTGTT GCGCACGCTG GCTCACGAGC TTGAACAGGG CGTCCCTTTT TCCAGCGCAT TAGTCTCCTG GCCGCAGGTA TTTCCGCCGC TCTACCAGAC GATGATCCGC ACCGGAGAAC TGACCGGCAA ACTGGCCGAA TGCTGCTTTG AACTGGCCCG TCAGCAAAAA GCGCAGCGGC AGATTACGGT TAGCGTGAAA AAGGCGCTGC GCTATCCCGC CATTATTCTG ACAATGGCCG CTCTGGTCGT TTTCGCCATG CTGCACTTTG TTCTGCCGGA ATTTGCCGCC ATTTACCGTA GCTTTAATAC CCCGCTCCCT CTTCTGACGC GCGGTATTAT CGCGATAGCG CAATGGGGGT CGGCATGGGG TTGGCTCATC TTGTTCCTGG CGATGCTCGT TGCTATCGCT CACCGCAGGG TAAAACAAAA GCCGTCCTGG CAAGCGCAGC GGCAGCGTCT TCTGCTACGG CTTCCCGTTA TGGGTCGCCT GATAAGAGGC CAGAAACTAG CGCAAATATT CACCGTACTG GCATTGACCC AAAGCGCAGG CATTCCTTTT CTTCAGGGAC TGGAAAGCGC TATCGATAGC CTCGGCTGCC CTTACTGGTC ACAGCGTTTA ACGCAGGTAC ATCAGGAGAT CGCCGCGGGC AATCCGGTCT GGTTGGCGCT AAAAAATACC CAGGAATTTA GTCCGCTATG CCTGCAACTG GTCAGAACGG GCGAAGCGTC CGGTTCACTC GATATCATGC TGCATAACCT TGCCCGTCAC CACAGTGAAA CTACGCTGGC GCTGGCCGAT AATCTGGCGT CGCTGTTGGA ACCGGCGTTA TTGATCATCA CCGGCTTAAT TATCGGTACG CTGGTGGTGG CGATGTATTT GCCGATTTTT CATCTGGGAG ACGCGATGAG CGGGATGGGA TAA
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Protein sequence | MSVKQLWRWQ GVNDKGQLEQ GVVWVDNRLA LIITLQHQRI MPLRIKRMGV NAALWKEEQS AEIIHQLATL IHAGLTLSEG LELLAQQHPH RQWQALLRTL AHELEQGVPF SSALVSWPQV FPPLYQTMIR TGELTGKLAE CCFELARQQK AQRQITVSVK KALRYPAIIL TMAALVVFAM LHFVLPEFAA IYRSFNTPLP LLTRGIIAIA QWGSAWGWLI LFLAMLVAIA HRRVKQKPSW QAQRQRLLLR LPVMGRLIRG QKLAQIFTVL ALTQSAGIPF LQGLESAIDS LGCPYWSQRL TQVHQEIAAG NPVWLALKNT QEFSPLCLQL VRTGEASGSL DIMLHNLARH HSETTLALAD NLASLLEPAL LIITGLIIGT LVVAMYLPIF HLGDAMSGMG
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