Gene SeSA_A0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0129 
SymbolleuA 
ID6519704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp132059 
End bp133630 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content55% 
IMG OID642745300 
Product2-isopropylmalate synthase 
Protein accessionYP_002113132 
Protein GI194737001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0229765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC AAGTCATTAT TTTTGATACG ACCTTACGCG ACGGCGAACA AGCGTTACAG 
GCCAGCCTGA GCGCGAAAGA GAAGCTGCAG ATTGCCCTGG CCCTTGAGCG CATGGGGGTT
GATGTCATGG AAGTAGGCTT CCCGGTCTCT TCTCCGGGTG ATTTTGAATC TGTCCAAACC
ATCGCCCGCA CCATCAAAAA CAGCCGCGTT TGCGCCCTGG CGCGTTGTGT AGAAAAAGAC
ATCGACGTCG CGGCACAGGC GCTGAAGGTC GCCGACGCGT TTCGTATTCA TACTTTTATC
GCCACCTCGC CAATGCACAT CGCCACCAAG CTGCGCAGCA CGCTGGATGA GGTCATCGAA
CGCGCGGTAT ACATGGTTAA GCGGGCGCGT AATTACACTG ATGACGTGGA GTTCTCCTGC
GAAGATGCTG GCCGGACGCC TGTTGACGAT CTGGCGCGCG TGGTGGAAGC CGCTATAAAC
GCCGGCGCGA GAACCATTAA TATTCCCGAT ACCGTGGGCT ATACCATGCC GTTTGAGTTC
GCGGGAATCA TTTCCGGCCT GTATGAACGT GTCCCCAATA TTGACAAAGC TATCATCTCC
GTTCATACCC ACGACGATTT AGGGATAGCA GTAGGCAACT CGCTGGCGGC AGTACATGCG
GGCGCGCGTC AGGTTGAAGG CGCGATGAAC GGTATCGGAG AACGTGCCGG TAACTGCGCG
CTGGAAGAAG TAATCATGGC GATTAAAGTG CGCAAAGACA TCATGAACGT ACACACCAAT
ATCAATCACC ACGAAATCTG GCGCACCAGC CAGACCGTCA GCCAGATCTG TAACATGCCG
ATCCCGGCCA ACAAAGCAAT TGTCGGCAGC GGCGCTTTCG CCCACTCTTC CGGCATCCAC
CAGGATGGCG TCCTCAAGAA CCGCGAAAAC TATGAAATCA TGACGCCTGA GTCCATCGGT
CTGAACCAGA TACAGCTGAA CCTGACCTCC CGCTCTGGCC GTGCCGCCGT GAAACATCGC
ATGGAAGAGA TGGGTTACAA AGACACAGAC TACAACATGG ACCACCTGTA CGACGCGTTC
CTGAAGCTGG CAGACAAAAA AGGCCAGGTG TTCGACTATG ACCTGGAAGC GCTGGCGTTT
ATTAATAAAC AGCAAGAAGA ACCAGAGCAT TTCCGTCTGG ATTACTTCAG CGTGCAGTCC
GGCTCCAGCG ATATCGCCAC TGCTTCCGTG AAGCTGGCCT GTGGTGAAGA GATCAAGGCC
GAGGCGGCGA ACGGCAACGG CCCGGTCGAC GCCATCTATC AGGCGATTAA CCGTATCACT
GGCTACGACG TTGAGTTGGT TAAATACGAC CTGAACGCCA AAGGCCAGGG CAAAGACGCG
CTGGGTCAGG TCGATATCGT CGTGAACCAT CATGGTCGCC GCTTCCACGG CGTCGGGCTG
GCGACGGATA TCGTCGAATC CTCCGCCAAA GCGATGGTGC ACGTACTGAA CAATATCTGG
CGCGCAGCCG AAGTTGAAAA AGAATTGCAA CGCAAAGCTC AAAATAAAGA GAACAACAAG
GAAACCGTGT AA
 
Protein sequence
MSQQVIIFDT TLRDGEQALQ ASLSAKEKLQ IALALERMGV DVMEVGFPVS SPGDFESVQT 
IARTIKNSRV CALARCVEKD IDVAAQALKV ADAFRIHTFI ATSPMHIATK LRSTLDEVIE
RAVYMVKRAR NYTDDVEFSC EDAGRTPVDD LARVVEAAIN AGARTINIPD TVGYTMPFEF
AGIISGLYER VPNIDKAIIS VHTHDDLGIA VGNSLAAVHA GARQVEGAMN GIGERAGNCA
LEEVIMAIKV RKDIMNVHTN INHHEIWRTS QTVSQICNMP IPANKAIVGS GAFAHSSGIH
QDGVLKNREN YEIMTPESIG LNQIQLNLTS RSGRAAVKHR MEEMGYKDTD YNMDHLYDAF
LKLADKKGQV FDYDLEALAF INKQQEEPEH FRLDYFSVQS GSSDIATASV KLACGEEIKA
EAANGNGPVD AIYQAINRIT GYDVELVKYD LNAKGQGKDA LGQVDIVVNH HGRRFHGVGL
ATDIVESSAK AMVHVLNNIW RAAEVEKELQ RKAQNKENNK ETV