Gene SeSA_A0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0117 
SymbolthiQ 
ID6518214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp123352 
End bp124059 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID642745291 
Productthiamine transporter ATP-binding subunit 
Protein accessionYP_002113123 
Protein GI194736321 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3840] ABC-type thiamine transport system, ATPase component 
TIGRFAM ID[TIGR01277] thiamine ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.051764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAC TGATTGATAT CACCTGGCTT TACCATCATT TGCCGATGCG TTTTACGCTG 
GCGGTAGAAC GCGGCGAGCA GGTGGCGATT CTTGGCCCCA GCGGCGCGGG GAAAAGCACG
TTGTTGAATT TAATTGCCGG TTTTCTTGCG CCTGCCAGCG GTACGCTACT GATTGCCGGC
GACGATCATA CGCTTACGCC GCCCTCACGC CGTCCGGTCT CAATGCTGTT TCAGGAGAAT
AATTTATTCA GCCACCTGAA TGTACAGCAA AATATCGGTC TGGGGCTAAA CCCCGGGTTA
ACGCTCAACG CCAGCCAGCG GGAAAAACGG GACGCTATCG CACGTCAGAT GGGCATTGAG
AGTCTGATGG CGCGTTTGCC GGGCGAGCTG TCCGGCGGCC AGCGTCAGCG GGTAGCGCTG
GCGCGCTGCC TGGTACGTGA ACAGCCAGTA CTGCTGCTGG ATGAACCGTT CTCCGCGCTC
GATCCCGCAC TGCGTCAGGA GATGCTGACG TTGGTCAGCG ATATCTGCCG CGAGCGACAG
CTCACGCTGT TGATGGTCTC GCACAGCGTG GAAGATGCGG CGCGAATTGC GCCCCGGTCA
ATCGTCGTGG CCGACGGACG CATTGCGTGG CAAGGCAAAA CAGACGAGCT ACTAAGCGGT
CAAGCCAGCG CCTCAGCGCT ATTGGGCATC AAATCCTATA TTTTGTAG
 
Protein sequence
MLKLIDITWL YHHLPMRFTL AVERGEQVAI LGPSGAGKST LLNLIAGFLA PASGTLLIAG 
DDHTLTPPSR RPVSMLFQEN NLFSHLNVQQ NIGLGLNPGL TLNASQREKR DAIARQMGIE
SLMARLPGEL SGGQRQRVAL ARCLVREQPV LLLDEPFSAL DPALRQEMLT LVSDICRERQ
LTLLMVSHSV EDAARIAPRS IVVADGRIAW QGKTDELLSG QASASALLGI KSYIL