Gene SeSA_A0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0089 
Symbol 
ID6516343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp92106 
End bp93512 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content54% 
IMG OID642745263 
Productputative metabolite transport protein YaaU 
Protein accessionYP_002113095 
Protein GI194735488 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.343682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.458255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG AAACGCCTTA TCCGGCCTAC AGATGCGCTT TGCCCGTGTT GAAACAGGAC 
ATCACCATGC AGCAGCCCAG GAACTTTGAT GACCTTAAAT TCTCCTCCAT TCATCGCAGA 
ATTATGCTGT GGGGAAGCGG CGGCCCGTTC CTTGATGGCT ACGTGCTGGT GATCATTGGC 
GTGGCGCTGG AACAACTGAC GCCGCTATTG CACCTTGATG CTGAATGGAT TGGCGCGCTC 
GGTGCGGCTA CGCTTGCCGG ACTGTTTATC GGCACCTCGT TGTTTGGCTA TATTTGCGAT 
AAAGTCGGGC GGCGTAAAAT GTTCCTGCTT GATATTATCG CTATCGGCGT TATCTCCGTG 
GCGACCATGT TTGTTTCCAC GCCGCTTGAA TTGCTGGTGA TGCGCGTTTT AATTGGCATT 
GTTATCGGCG CGGATTACCC TATCGCCACT TCCATGATTA CGGAGTTTTC CAACACCCGC 
CAGCGCGCGT TCTCCATCGG TTTTATCGCC GCGATGTGGT ACGTCGGCGC GACCTGCGCC 
AACCTGGTGG GTTACTGGCT GTATGACATG GAAGGCGGCT GGCGCTGGAT GCTTGGCAGC 
GCCTTTATCC CGTGCTTAAT CATTTTGATT GGCCGCTTTG ACCTGCCGGA ATCGCCACGC 
TGGCTATTGC GAAAAGGACG GGTAAAAGAG TGCGAACAAA TGATGATCAA ACTGTTCGGC 
GAACCGGTCT GCTTTGACGA TGAGCCGCCG CAGGAGACCC GCTTCCTGCA ACTGTTTAAT 
CGCCGTCATT TCCCGTTTGT ACTGTTCGTT GCGGCTATCT GGACCTGTCA GGTAATCCCG 
ATGTTCGCTA TCTATACCTT TGGGCCGCAG ATCGTCGGGT TACTCGGCTG GGAGCAGGGG 
CGCAACGCGG CGCTCGGCAA TGTGGTGATT AGCCTCTTTT TTATGCTGGG CTGTATACCA 
GCGATGTTCT GGCTAAACAG TATTGGCCGT CGCCCTCTGC TTATTGGCAG CTTCGCCATG 
ATGACTATCG CGCTGGCACT GCTGGGGCTG GTGTCAAATC TGGGCATCAT ACTGGTCGTG 
GTGGCGTTTG CGGTATACGC CTTCTTTTCC GGCGGGCCGG GCATACTGCA ATGGCTTTAT 
CCTAATGAAC TCTTCCCGAC GGATATTCGC GCTTCGGCCG TGGGGGTCAT CATGTCATTA 
AGCCGCATCG GAACCATTGT CTCCACCTGG GCATTACCAA TTTTTATTAC TCGTTACGGC 
ATTAATAACG TCATGCTGAT TGGCGCGTTG ATTTCGTTAG TCGGGCTTGG CGTATCGGTG 
ATGTTTGCCC CGGAAACTCG CGGCTTGACG CTAACACAGA CCGGAAACAT GACTTTGCGC 
GGAACGCCAT CGGATAACCC TCGTTAA
 
Protein sequence
MAAETPYPAY RCALPVLKQD ITMQQPRNFD DLKFSSIHRR IMLWGSGGPF LDGYVLVIIG 
VALEQLTPLL HLDAEWIGAL GAATLAGLFI GTSLFGYICD KVGRRKMFLL DIIAIGVISV 
ATMFVSTPLE LLVMRVLIGI VIGADYPIAT SMITEFSNTR QRAFSIGFIA AMWYVGATCA 
NLVGYWLYDM EGGWRWMLGS AFIPCLIILI GRFDLPESPR WLLRKGRVKE CEQMMIKLFG 
EPVCFDDEPP QETRFLQLFN RRHFPFVLFV AAIWTCQVIP MFAIYTFGPQ IVGLLGWEQG 
RNAALGNVVI SLFFMLGCIP AMFWLNSIGR RPLLIGSFAM MTIALALLGL VSNLGIILVV 
VAFAVYAFFS GGPGILQWLY PNELFPTDIR ASAVGVIMSL SRIGTIVSTW ALPIFITRYG 
INNVMLIGAL ISLVGLGVSV MFAPETRGLT LTQTGNMTLR GTPSDNPR