Gene SeSA_A0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0060 
Symbol 
ID6516598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp63552 
End bp64853 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content64% 
IMG OID642745235 
Productoxaloacetate decarboxylase beta chain 
Protein accessionYP_002113067 
Protein GI194737067 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCGGGCCAG 
GCCATCATGC TGCTGGTCAG CCTGCTGTTG CTGTGGCTGG CGATAGCGAA AAAGTTCGAA
CCGTTACTGC TGCTGCCGAT TGGCTTCGGC GGCCTGCTCT CCAACATCCC GGAAGCGGGC
ATGGCGCTGA CCGCGCTGGA GAGCCTGCTG GCGCATCACG ACGCCGGGCA GCTGGCGGTG
ATTGCCGCGA AGCTTAACTG CGCGCCGGAC GTGCACGCCA TTAAAGAGGC ATTAGCGCTG
GCGCTGCCGT CAGTGCAGAG TCAGATGGAA AATCTGGCGG TGGACATGGG CTACACGCCG
GGGGTACTGG CGCTGTTCTA TAAAGTGGCG ATTGGCTCCG GCGTCGCGCC GCTGGTCATC
TTTATGGGCG TGGGGGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG
CTGCTCGGCG CGGCGGCGCA GTTCGGTATC TTCGCTACGG TGCTGGGGGC GCTGACGCTG
AACTACTTCG GCCTGATTTC CTTCACCCTG CCGCAGGCTG CGGCCATCGG CATTATCGGC
GGCGCGGACG GCCCGACGGC GATTTATCTG TCGGGCAAGC TGGCGCCGGA GCTGCTGGGG
GCCATCGCGG TGGCGGCGTA TTCGTATATG GCGCTGGTGC CGTTAATCCA GCCGCCGATT
ATGAAGGCGC TGACCACGGA GACTGAGCGC AAAATCCGCA TGGTGCAGCT GCGCACCGTC
AGCAAGCGGG AAAAAATCCT CTTCCCGGTG GTGCTGCTCA TGCTGGTGGC CCTGCTGCTG
CCGGACGCCG CGCCGCTGCT GGGGATGTTC TGCTTTGGCA ACCTGATGCG CGAAAGCGGC
GTGGTGGAGC GTCTGAGCGA CACGGTACAG AACGGGCTGA TTAATATCGT GACCATCTTC
CTCGGGCTGT CGGTGGGCGC GAAGCTGGTG GCGGACAAGT TCCTGCAGCC GCAGACGCTG
GGCATTCTGC TTCTGGGTGT GATTGCGTTC GGGATTGGGA CGGCGGCCGG GGTGCTGATG
GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATCAACC CGCTTATCGG TTCGGCGGGG
GTGTCGGCGG TGCCGATGGC GGCACGCGTA TCGAACAAGG TGGGGCTGGA ATCGGACCCG
CAGAACTTCC TGCTGATGCA CGCGATGGGC CCGAACGTGG CGGGGGTGAT TGGCTCGGCG
ATAGCTGCCG GGGTGATGCT GAAATACGTG CTGGCGATGT AA
 
Protein sequence
MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG 
MALTALESLL AHHDAGQLAV IAAKLNCAPD VHAIKEALAL ALPSVQSQME NLAVDMGYTP
GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL
NYFGLISFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI
MKALTTETER KIRMVQLRTV SKREKILFPV VLLMLVALLL PDAAPLLGMF CFGNLMRESG
VVERLSDTVQ NGLINIVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVIAF GIGTAAGVLM
AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDP QNFLLMHAMG PNVAGVIGSA
IAAGVMLKYV LAM