Gene SeSA_A0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0057 
Symbol 
ID6515959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp60168 
End bp61088 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content58% 
IMG OID642745232 
Productribonucleoside hydrolase RihC 
Protein accessionYP_002113064 
Protein GI194734027 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.342327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAT CCCTACACAT TATTCTTGAT ACCGATCCAG GCATTGATGA CGCCGCCGCG 
ATTGCCGCTG CGCTGTTTGC CCCCGAGCTG GATCTGCAAC TGATGACCAC CGTTGCCGGC 
AACGTTTCGG TCGAAAAAAC CACCCGTAAC GGCTTACAGC TCCTGCATTT CTGGGACGCC 
GATGTGCCAC TTGCCCAGGG GGCCGCGACG CCGCTGCTGC GTCCGTTACG CGATGCGGCA 
TACGTCCACG GCGAATCCGG CATGGAAGGC TATGATTTTG TCGACCATCA GCGCCAACCG 
TTGGCGAAGC CAGCGTTTAT CGCTATCCGG GATGTGCTGA TGAACGCCCC GGAGCCCATG 
ACATTGGTGG CGATAGGGCC ATTGACCAAT ATTGCGTTGC TACTGATGCA CTATCCGGAG 
TGCCGCTTCA ACATTCACCG GCTGGTGATT ATGGGCGGTT CCGCAGGGCG CGGCAATTTT 
ACGCCTAATG CTGAATTTAA CATTGCTGTC GATCCGGAAG CCGCCGCCCA CGTATTTCGT 
AGCGGCATTG AGATTGTGAT GTGTGGGCTG GACGTCACCA ATCAGGCCGT GTTGACGCCG 
GAGTATCTGG CTACGCTTCC TGCGCTTAAT AAAACCGGCG GCATGCTGCA TGCATTGTTC 
AGCCATTACC GCAGCGGCAG TATGCAAAGC GGTCTGCGGA TGCACGATCT CTGCGCTATC 
GCCTGGCTGG TGCGTCCGGA GCTTTTTACC CTGCAATCCT GTTTTGTGGC CGTAGAAACG 
CAGGGGCAAT ATACCGCAGG TACCACGGTG GTGGATATTG AAGGGCGTCT GGGGCAGCCC 
GCCAACGCGC AGGTGGCGCT GGCGCTGGAT GTGGACGGTT TTCGTCAGTG GGTGGCTGAG 
GTGTTTGCCT GTGCGCCGTA A
 
Protein sequence
MAASLHIILD TDPGIDDAAA IAAALFAPEL DLQLMTTVAG NVSVEKTTRN GLQLLHFWDA 
DVPLAQGAAT PLLRPLRDAA YVHGESGMEG YDFVDHQRQP LAKPAFIAIR DVLMNAPEPM 
TLVAIGPLTN IALLLMHYPE CRFNIHRLVI MGGSAGRGNF TPNAEFNIAV DPEAAAHVFR 
SGIEIVMCGL DVTNQAVLTP EYLATLPALN KTGGMLHALF SHYRSGSMQS GLRMHDLCAI 
AWLVRPELFT LQSCFVAVET QGQYTAGTTV VDIEGRLGQP ANAQVALALD VDGFRQWVAE 
VFACAP