Gene SeSA_A0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0042 
Symbol 
ID6517343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp42937 
End bp44184 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content50% 
IMG OID642745217 
Productputative cytoplasmic protein 
Protein accessionYP_002113049 
Protein GI194735317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.315374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTC ACATTAATGT CGATGCTTGC AAAACGCCAG GCTGCAAAAA TCTGGGGATT 
CTGGGGAGTC CAGACTATCT ACCTCAAGGG AAAAATGTTC TCTGTCGAGC GTGCGGTTTT 
TTGTTCCCCA TTATCTCAGC CAGATCGCTT AATCTTTTTC GCCAGGCGGC GAATCAACCC 
TGGAAAGGTC TGGTGAAGTC CTGTCCGCAT TGTGGCGGGA CGTCGCTGAA AAAATATGGA 
TTTTCCACTA AAGGTGAACG GCGTATGTAT TGCCGCCAGT GTAATAAAAC GTTCATCTCC 
TATACCGCTA TCAGGGGCGA CGCCAGACAA GAGAACCTTG CCACGTTGAT TGGCGAAGGA 
GCGTCGCTAG TTGAAATACG CGCGGCGCTG GCGATAGACA GCACGGGTTT TAGCCGCGAA 
TTACAAAAAC TGTCCCGTCG CGCTAATCAA GCGGAACGCG ATTTTGTGTT TCCCGCGTTT 
GACATCGCTA TGAGCACGCG GGCGTTTCGT GTGAAATTTA ACGGCGGCGA CAGCAGCTTA 
TACGTGTTGG TGACGGCGGA AGAAGAGAGC GGTAAGGTCG TCGCGATCTC AACGAATTAC 
TCTGCACAAC CGGTGGAAGC GGATTATCAA TATCATTCTG ATTACGAAGA ACGACTCCCG 
TCCGGCACGC TGGCGCATCT GGTGCAGCGA AAAGAGGCGA TGACCATGCG CCGTAATGTA 
TTATTTGATG TGGATTACGG CCCCGCCATT TTATATAAAA ACGATCCGGG GATGTTAGTA 
AAACCCGTAT TACCTGCTTA TCGACATTTT GAGTTGGTTC AGGCGTTGAC GGATGAGCGC 
TCCCTGAATG TCCAGCATTA TCTCGATCAC GAATGCTTCA TTCTGGGCGG CTGTATGATG 
GCGAATTTTA GCTATCTTCG TCAGGGTCGC TGCCATATTT CGTTTGTGCG TGAAAGAGGC 
GTTACGCCGC CCAAGCGCGA TCTCCCTCCG CGGTTGTTTT TGAGCGGCGG AATTCGCAAC 
AACGTCTGGC GTACATTTTC CACACGGGAT TATGCGATGG CGGTATGCAA TCTCACAGGA 
AATAAAAAGG TGAGTTTGTT ACGCCATGCG ACGTTAAATA GCGCGACGGC GTTTATTCGC 
TATGTTCACA ACCATCCCTT CCTGCCGCAT CTTAACCGGA TGTCTCCTGG CAATGTTGTT 
GCCGTACTGG ATTACCTAAA ATTTGAATAT AACGCTTCAC GTAACTGA
 
Protein sequence
MFSHINVDAC KTPGCKNLGI LGSPDYLPQG KNVLCRACGF LFPIISARSL NLFRQAANQP 
WKGLVKSCPH CGGTSLKKYG FSTKGERRMY CRQCNKTFIS YTAIRGDARQ ENLATLIGEG 
ASLVEIRAAL AIDSTGFSRE LQKLSRRANQ AERDFVFPAF DIAMSTRAFR VKFNGGDSSL 
YVLVTAEEES GKVVAISTNY SAQPVEADYQ YHSDYEERLP SGTLAHLVQR KEAMTMRRNV 
LFDVDYGPAI LYKNDPGMLV KPVLPAYRHF ELVQALTDER SLNVQHYLDH ECFILGGCMM 
ANFSYLRQGR CHISFVRERG VTPPKRDLPP RLFLSGGIRN NVWRTFSTRD YAMAVCNLTG 
NKKVSLLRHA TLNSATAFIR YVHNHPFLPH LNRMSPGNVV AVLDYLKFEY NASRN