Gene SeSA_A0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0023 
Symbol 
ID6519482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp24472 
End bp25014 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID642745199 
Productfimbrial protein 
Protein accessionYP_002113031 
Protein GI194737212 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.159363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0604407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC CTGTACTAGC ATTAATGGTC TCTGCAATTG CCTTTGGCGG AATGTTGTCC 
ACCGCGCAAG CGGATACTAC AACCGTCACT GGCGGTACGG TAAATTTTGT CGGACAGGTC
GTTGACGCCG CCTGTTCTGT TTCCGCTGAC TCTGTCGATC AGACCGTGAC ATTAGGCCAG
GTTCGCGCCA GTAAATTAAC CGAGGCCGGT ATGGTGGCGA ATCAAAAAGA AGATTTCACC
ATTAAACTGG AAGACTGCGA TACTCAGACC AGCCAGAATG CGGCGGTGAT TTTTAATGGC
CAGCAGGACG CAAACCAGCC GGGTTCGCTG GCGAATACCG CTGGGGCAGG TTCGGCGACG
AATGTGGCAT TACAACTTTA TGGACCAGAT GGCCAGGCGC TGAATATCGG TGAATCGTCC
AGTACTGTTA CCTTGAACGA TGGCGAAAAC GTTATTCCGC TTAGCGTGGA TTATATCGCT
ACCGGTACGG CGACTGCCGG TAATGTTACC GCGACGGCGA CATTTAGCAT GGTTTATTCC
TGA
 
Protein sequence
MKKPVLALMV SAIAFGGMLS TAQADTTTVT GGTVNFVGQV VDAACSVSAD SVDQTVTLGQ 
VRASKLTEAG MVANQKEDFT IKLEDCDTQT SQNAAVIFNG QQDANQPGSL ANTAGAGSAT
NVALQLYGPD GQALNIGESS STVTLNDGEN VIPLSVDYIA TGTATAGNVT ATATFSMVYS