Gene SeSA_A0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0016 
Symbol 
ID6515941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp15016 
End bp15963 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content41% 
IMG OID642745192 
Productputative transcriptional regulator 
Protein accessionYP_002113024 
Protein GI194735063 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCGA AAGGTGCCAA CAAGAGCTTT GATTATAATT TAATCAAAAT TCTTGACGCT 
GTTATTTTGT CAGGAAATGC GGCTATGGCG GCAAAAAAGC TAGGCATTAC ACCGGCTGCC 
GTCTCTATGG CGTTAAAGCG CCTGCAGAGT TATTACCCGG AAGAACTGTT TAGCAGAGGG 
AAAGGCGGGC TCATCCCCAC AGCTAAGGCT GTCGACATTC ACCAAAATTT CAGTCAGGTG 
ATGAAACTGG TGGATGACAC ATTTCTCTGT AATAGCAAAA AAGATGAAGC GTTCCAGATA 
ACGTTATTAG GCAGTGATAT TGTTGAAAGC TATTATCTTT CTCAGCTCTA TAACAGCGAT 
ATTTTTGACC GTATTTTGAT AAATCATTTC TCTGTCAGAA ATATGAATCG GGAGCGTATC 
AGCGAACTTC TGTTTACTGC GCAAGGCGAT CTGTTGATTG GTGCCGAACC TTTGCTGGAG 
TCCGGCATAG AGAATCAAAT TATTGATAGT TTTAAATCAT TTGTTTGTAT CTGTAGCAGT 
AAACACATGC TGAGTACCCT CTCACAGCTA TCGCTACATC ATTTTTATTC TTCGCGTCAT 
GCGTTATATC AGCCGGGGAT GGGGGCTTCA GTGATATATC ATGATAGCGA GTTATTTAAG 
GATGAGCTTT ACTATACTGG CAGGCGTATT GTCGGCTATC GCAGTGATTC GCTTAACGGT 
TTGATGAGCA TGATCGAACG AACCTCATTG ATTGCATTGA TGCCTTTGAA ATTAGCGCTT 
TTTTATAAAA ATCATCGTAA ATATGACATT AAATTTATTC AGCCTCCGCC CGAACTGGCT 
TTGAAGTCAG TTCAGGTCTA TGCATCCTGG AATAAAAATA GTAGAAATAT ATCGACGATT 
AATGAGATGG TAAGTATGTT ACAAACGCTT TCCTCCTTCC GTCGCTAA
 
Protein sequence
MGSKGANKSF DYNLIKILDA VILSGNAAMA AKKLGITPAA VSMALKRLQS YYPEELFSRG 
KGGLIPTAKA VDIHQNFSQV MKLVDDTFLC NSKKDEAFQI TLLGSDIVES YYLSQLYNSD 
IFDRILINHF SVRNMNRERI SELLFTAQGD LLIGAEPLLE SGIENQIIDS FKSFVCICSS 
KHMLSTLSQL SLHHFYSSRH ALYQPGMGAS VIYHDSELFK DELYYTGRRI VGYRSDSLNG 
LMSMIERTSL IALMPLKLAL FYKNHRKYDI KFIQPPPELA LKSVQVYASW NKNSRNISTI 
NEMVSMLQTL SSFRR