Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0006 |
Symbol | |
ID | 6519622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 5966 |
End bp | 7423 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642745182 |
Product | amino-acid carrier protein AlsT |
Protein accession | YP_002113014 |
Protein GI | 194735924 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGCAT CAACAAGAGG GACGTTAATG CCTGAGTTTT TCAGTTTTAT TAACGAAATA CTCTGGGGCT CGGTAATGAT TTACCTGCTG CTCGGCGCAG GATGTTGGTT TACCTGGCGT ACCGGATTCA TTCAGTTTCG TTATATTCGC CAATTTGGCC GCAGTCTGAA AGGCAGCCTT AGCCCGCAGC CAAGCGGCCT GACGTCATTT CAGGCGCTGT GTACCAGCCT CGCGGCGCGG ATTGGCAGCG GTAATCTGGC CGGCGTGGCG CTGGCTATCG CCGCAGGCGG TCCCGGCGCG GTATTCTGGA TGTGGGTCTC GGCCATCATT GGCATGGCGA CCTCCTTCGC CGAGTGTTCG CTTGCCCAGC TTTATAAAGA ACGTGACCCG ACAGGCCAGT TCCGCGGCGG CCCGGCGTGG TATATGGCGC GCGGGCTGGG AATGCGCTGG ATGGGCGTGG TTTTCGCCCT CTTTCTGCTC GTCGCCTACG GGTTGATTTT TAATAGCGTG CAGGCGAATG CCGTCTCACG CGCGCTCCAT TTCGCCTTCA ACATTCCGCC GCTTATCTCC GGCATTGCTC TGGCGTTCTG TGCCCTGTTA ATTATCATTC GCGGCATAAA AGGCGTCGCC CGCCTGATGC AATGGCTGAT TCCCCTCATC GCGTTATTGT GGGTCGCCGG CAGCGTATTC ATTTGCCTCT GGCATATTGA GCAAATGCCT GGCGTTATCG CCTCGATAGT CAAAAGCGCA TTTGGCTGGC AGGAAGCCGC GGCAGGCGCA GCCGGATATA CGCTCACTCA GGCTATTACC AGCGGTTTTC AGCGTGGGAT GTTCTCTAAT GAAGCGGGAA TGGGGTCAAC GCCTAATGCG GCCGCAGCGG CAACGTCGTA TCCCCCTCAC CCTGTCGCGC AGGGGATTGT GCAAATGATT GGCGTATTCA GCGACACCAT TATCATCTGT ACCGCCAGCG CGATGATTAT CCTGCTGGCG GGGAATCACG CGTCCCACTC GTCAACAGAA GGCATTCAGC TTCTCCAACA TGCAATGGTT TCGTTGACCG GTGAATGGGG CGCCAGTTTT GTCGCGCTTA TCGTCATTCT GTTCGCGTTC AGTTCTATCG TCGCCAACTA TATTTACGCT GAAAACAATC TGTTTTTTCT GCGGTTACAT AACGCAAAGG CCATCTGGCT ATTACGCCTT GCGACGCTTG GCATGGTTAT CGCCGGTACG CTTATCAGTT TTCCGCTGAT ATGGCAGCTC GCTGACATGA TCATGGCCTG TATGGCCATT ACCAATCTGA CGGCGATTTT GTTGCTCTCA CCGGTGGTGT ATACCCTCGC CAGCGATTAT CTGCGACAAC GGAAACTGGG CGTAAGACCG CAGTTCGATC CGCGGCGCTT CCCGGATATC GAACCACAAC TGGCGCCAGA TACCTGGGAT GCGGCATCGC GCGATTAA
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Protein sequence | MPASTRGTLM PEFFSFINEI LWGSVMIYLL LGAGCWFTWR TGFIQFRYIR QFGRSLKGSL SPQPSGLTSF QALCTSLAAR IGSGNLAGVA LAIAAGGPGA VFWMWVSAII GMATSFAECS LAQLYKERDP TGQFRGGPAW YMARGLGMRW MGVVFALFLL VAYGLIFNSV QANAVSRALH FAFNIPPLIS GIALAFCALL IIIRGIKGVA RLMQWLIPLI ALLWVAGSVF ICLWHIEQMP GVIASIVKSA FGWQEAAAGA AGYTLTQAIT SGFQRGMFSN EAGMGSTPNA AAAATSYPPH PVAQGIVQMI GVFSDTIIIC TASAMIILLA GNHASHSSTE GIQLLQHAMV SLTGEWGASF VALIVILFAF SSIVANYIYA ENNLFFLRLH NAKAIWLLRL ATLGMVIAGT LISFPLIWQL ADMIMACMAI TNLTAILLLS PVVYTLASDY LRQRKLGVRP QFDPRRFPDI EPQLAPDTWD AASRD
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