Gene SeSA_A0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0004 
SymbolthrC 
ID6515627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3734 
End bp5020 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content56% 
IMG OID642745180 
Productthreonine synthase 
Protein accessionYP_002113012 
Protein GI194736906 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.66148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT ATAATCTGAA AGACCATAAT GAGCAGGTCA GCTTTGCGCA GGCCGTCACG 
CAAGGACTGG GCAAACAGCA GGGACTTTTT TTTCCGCACG ATCTGCCGGA GTTTAGCCTG 
ACGGAAATTG ATGAGATGCT CAACCAGGAC TTTGTCAGCC GTAGCGCAAA GATCCTCTCG 
GCATTTATTG GCGATGAAAT ACCGCAGCAA ATTCTGGAAG AGCGCGTCCG CGCGGCGTTT 
GCGTTCCCGG CGCCGGTAGC GCAGGTAGAA AGCGATGTCG GTTGCCTGGA GCTATTCCAT 
GGTCCGACGC TGGCCTTTAA AGACTTCGGC GGGCGTTTTA TGGCGCAAAT GCTGACGCAT 
ATCAGCGGCG ACAAACCGGT GACGATTCTG ACCGCAACGT CAGGCGATAC CGGCGCGGCG 
GTGGCTCACG CGTTCTATGG CCTGGAAAAT GTGCGGGTCG TTATTCTCTA CCCGCGCGGT 
AAAATCAGTC CGTTGCAGGA AAAACTGTTC TGTACGCTGG GCGGCAACAT TGAAACCGTG 
GCGATCGACG GCGATTTCGA CGCTTGCCAG GCGCTGGTGA AACAGGCATT TGATGACGAA 
GAACTGAAAA CGGCGCTGGG GCTGAATTCG GCTAATTCAA TTAATATCAG CCGCCTGTTG 
GCGCAAATTT GCTACTACTT TGAAGCCGTG GCGCAACTGC CGCAGGGGGC GCGTAACCAA 
CTGGTAATCT CCGTACCCAG CGGCAACTTT GGCGATTTGA CGGCAGGACT GCTGGCGAAG 
TCGTTAGGCC TACCGGTGAA ACGTTTTATC GCCGCCACCA ACGTCAACGA CACGGTGCCG 
CGTTTTCTGC ATGACGGGAA GTGGGCGCCG AAAGCGACGC AGGCGACCCT CTCGAATGCG 
ATGGATGTCA GCCAGCCGAA TAACTGGCCG CGTGTGGAGG AGCTATTCCG CCGTAAAATC 
TGGCGCCTGA CTGAGCTGGG CTATGCGGCG GTGGATGACA CTACGACACA GCAGACGATG 
CGCGAGCTGA AAGCGAAAGG TTATATCTCG GAACCTCATG CGGCGGTGGC GTATCGGGCA 
TTACGCGACC AGTTAAACCC TGGCGAGTAT GGCTTGTTTC TCGGAACGGC GCATCCGGCG 
AAGTTTAAAG AAAGCGTGGA GTCCATTCTG GGAGAAACGC TGGCATTGCC TGAAGCGCTC 
GCCGAACGCG CCGATCTGCC GCTGCTTTCA CATCATCTGC CTGCGGATTT TGCCGCCCTG 
CGTAAGCTGA TGATGACCCG CCAGTAA
 
Protein sequence
MKLYNLKDHN EQVSFAQAVT QGLGKQQGLF FPHDLPEFSL TEIDEMLNQD FVSRSAKILS 
AFIGDEIPQQ ILEERVRAAF AFPAPVAQVE SDVGCLELFH GPTLAFKDFG GRFMAQMLTH 
ISGDKPVTIL TATSGDTGAA VAHAFYGLEN VRVVILYPRG KISPLQEKLF CTLGGNIETV 
AIDGDFDACQ ALVKQAFDDE ELKTALGLNS ANSINISRLL AQICYYFEAV AQLPQGARNQ 
LVISVPSGNF GDLTAGLLAK SLGLPVKRFI AATNVNDTVP RFLHDGKWAP KATQATLSNA 
MDVSQPNNWP RVEELFRRKI WRLTELGYAA VDDTTTQQTM RELKAKGYIS EPHAAVAYRA 
LRDQLNPGEY GLFLGTAHPA KFKESVESIL GETLALPEAL AERADLPLLS HHLPADFAAL 
RKLMMTRQ