Gene SeSA_B0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0115 
Symbol 
ID6515180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp96402 
End bp97598 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID642745159 
ProductTriI protein 
Protein accessionYP_002112991 
Protein GI194733887 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2948] Type IV secretory pathway, VirB10 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACG AACAGGAAGA CATTAAAACC GCCGCCGAAC TGGAGGCGGA AGCCCGCGAG 
CGGGCGCGGG CAGAGATTGA CGGCGATAAA CCCGCCGCAG GCGCGGTGCC ACCCGGACAG 
CCACAGGTGG TGCAGCACGC GAAGCGCCGC AGCCGCCGCT CGCTCGTGCT GGCCGCCATC 
AGCCTGGTGT TACTGGTCAT TATCGCCACC GGCGGGGATT ACCTGATGGC GAAACTGAAG 
GGTGACGGCA GCGGAAAAAG CGCGAGCCAT GAACCGGAAT CGCACGCCAC CTCCCCCGCC 
CGCGAGCGCA ATAACCTCGG ACGGGATCTG AACCCGCTGG GACAGCTGGC AGACACAACC 
GGCCAGGAGA AGACTACTCC GACTGATACC GCCGCGCCGC CGCAGGCATC ACCGCCCCCC 
CTGACGTTTG ACAAGGTCAG CGCCCTGGCA GACAGCGCCC CAACCACTGC AAGCAGCGCC 
CCGAAAAGCA CGTCCAGCAG TAACGTATCA CCTGCGGGCA GCGCGTCCGC GCCAGGCTCT 
GCAACACCCG CCGGGCAGTC GCAGGATAAC GGGCTGGCGC GCATTACCGG CGTGAAGCGG 
CTCGGCCTCG ATCCGGATTT GTACATTCCG GCCGACCGGC ATATCCCCTG CGCGATGATG 
CAGCGCTTTG TATCGGACGT GGGCGGGCGC TTTAACTGCC TTATCAGCGA GGACATTTAC 
AGCGCCAGCA ACGCCGTGCG CCTTATCCCG GCAGGCACTG AGGCGCGCGG CCTGTACCGC 
ACCGGCACGC TGAAAAACGG GCAGGGGCGT CTGTTCCTCG CCATCACCGA GCTGCGCACG 
CCGGAACCCG GCCGCCTGGT TATTCCGATG GTTGACAGCC AGGCCGTGGG GGCGCTTGGC 
GAGAACGGCG TCGCGGGCTG GATAGACAAT CACTGGCTGG AGCGGATAGG TAATACCCTC 
CTGCTCGGCA CGGTACAGGA CTTTGCCGCT GCGGCCTCCG GCTCGTCGCC GGGCAAGGAT 
CGCAACACGG ACTACACGGA GAACACCCGC GCGGCCACGG CGGAAATGGC AAAAACGCTC 
CTGGAAAACA GCATCAACAT CCCGCCGACG ATGTACCTCA ACCAGGGTGA CGTGATTGGC 
CTGGTCACGG GGGCGGACAT TGATTTTTCA GACGTCTACA GACTGCGCAT GAGGTAA
 
Protein sequence
MMNEQEDIKT AAELEAEARE RARAEIDGDK PAAGAVPPGQ PQVVQHAKRR SRRSLVLAAI 
SLVLLVIIAT GGDYLMAKLK GDGSGKSASH EPESHATSPA RERNNLGRDL NPLGQLADTT 
GQEKTTPTDT AAPPQASPPP LTFDKVSALA DSAPTTASSA PKSTSSSNVS PAGSASAPGS 
ATPAGQSQDN GLARITGVKR LGLDPDLYIP ADRHIPCAMM QRFVSDVGGR FNCLISEDIY 
SASNAVRLIP AGTEARGLYR TGTLKNGQGR LFLAITELRT PEPGRLVIPM VDSQAVGALG 
ENGVAGWIDN HWLERIGNTL LLGTVQDFAA AASGSSPGKD RNTDYTENTR AATAEMAKTL 
LENSINIPPT MYLNQGDVIG LVTGADIDFS DVYRLRMR