Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_B0114 |
Symbol | virB9 |
ID | 6515216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011092 |
Strand | + |
Start bp | 95512 |
End bp | 96405 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642745158 |
Product | P-type conjugative transfer protein VirB9 |
Protein accession | YP_002112990 |
Protein GI | 194733829 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAGG TACTGATGTG TGCCCTCCTG CTGACCGCAG CGTCAGCATG GGGTGCGGCG ACACCGCGCG GCAGCGCCTA TGACAGCCGC ATGCAGAACA TCCCCTACAA CAGCCAGAAC ACGACAGTGA TTAACACGCG GGCGGGTTAC ATCACGACGC TGGTTTTTGA CGCCGACGAG GAGGTGATCA CCGCCACCGC TGGTTTTCCG CAGGGCTGGA CGATCACACC CGACCGTAAC CGCGTGGGGA TTAGCCCCGC GCCGGTGAAG CAGCCGGTAA CGGATGCGGA CGGCAAAACC GTCCAGAAGA TTTTCACCCC CACGCAGCAG GACTGGCAGA CCAACCTGTT TGTGACCACC ACAAAGCGCG ACTACAGCCT GATGCTGAAC GTGATCGATA ACGATCGCGA GGCGGGAAAT CTGGCCTTTG TGGTGCGCTT CAGCTACCCC GACGATACCC GCAGGCAGAA CGACGCAGCC CGCCTCGCCC GTCAGCAGGA GCTTCAGGCC GCGCAGGAGA AAGAACGCAT TCAGTTTGCC CTGAAGAAAT CCACTGCGCC GCGCAACTGG AACTACACCC GCAGGGTGGC GGCAGGTTCG GAGTCGATCA CCCCGGATTT TGCGTATGAC GACGGCCGGT TTACCTATCT CGGCTTTTCA CCGCAGAAGC TGATCCCGTC GCCGACCGTC ATCGTCGGCG GCAGCGAGCA GGTGATCACC CCGACCTTCA GCACCGAGGG TAACTACCGG GTGATGGTAC TGCGCTCTCT TTCTCCACGC TTTGTGCTGC GCTACGGCAG CCAGGTCGTG GGGATTGAAA ACGGCAGTTA CGGGAAAGTC ACCGTGGCGA ACGGCAGCAC CGTCTCACCG GATGTGAAAC TGGAGAGCAA ATGA
|
Protein sequence | MNKVLMCALL LTAASAWGAA TPRGSAYDSR MQNIPYNSQN TTVINTRAGY ITTLVFDADE EVITATAGFP QGWTITPDRN RVGISPAPVK QPVTDADGKT VQKIFTPTQQ DWQTNLFVTT TKRDYSLMLN VIDNDREAGN LAFVVRFSYP DDTRRQNDAA RLARQQELQA AQEKERIQFA LKKSTAPRNW NYTRRVAAGS ESITPDFAYD DGRFTYLGFS PQKLIPSPTV IVGGSEQVIT PTFSTEGNYR VMVLRSLSPR FVLRYGSQVV GIENGSYGKV TVANGSTVSP DVKLESK
|
| |