Gene SeSA_B0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0114 
SymbolvirB9 
ID6515216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand
Start bp95512 
End bp96405 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID642745158 
ProductP-type conjugative transfer protein VirB9 
Protein accessionYP_002112990 
Protein GI194733829 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGG TACTGATGTG TGCCCTCCTG CTGACCGCAG CGTCAGCATG GGGTGCGGCG 
ACACCGCGCG GCAGCGCCTA TGACAGCCGC ATGCAGAACA TCCCCTACAA CAGCCAGAAC
ACGACAGTGA TTAACACGCG GGCGGGTTAC ATCACGACGC TGGTTTTTGA CGCCGACGAG
GAGGTGATCA CCGCCACCGC TGGTTTTCCG CAGGGCTGGA CGATCACACC CGACCGTAAC
CGCGTGGGGA TTAGCCCCGC GCCGGTGAAG CAGCCGGTAA CGGATGCGGA CGGCAAAACC
GTCCAGAAGA TTTTCACCCC CACGCAGCAG GACTGGCAGA CCAACCTGTT TGTGACCACC
ACAAAGCGCG ACTACAGCCT GATGCTGAAC GTGATCGATA ACGATCGCGA GGCGGGAAAT
CTGGCCTTTG TGGTGCGCTT CAGCTACCCC GACGATACCC GCAGGCAGAA CGACGCAGCC
CGCCTCGCCC GTCAGCAGGA GCTTCAGGCC GCGCAGGAGA AAGAACGCAT TCAGTTTGCC
CTGAAGAAAT CCACTGCGCC GCGCAACTGG AACTACACCC GCAGGGTGGC GGCAGGTTCG
GAGTCGATCA CCCCGGATTT TGCGTATGAC GACGGCCGGT TTACCTATCT CGGCTTTTCA
CCGCAGAAGC TGATCCCGTC GCCGACCGTC ATCGTCGGCG GCAGCGAGCA GGTGATCACC
CCGACCTTCA GCACCGAGGG TAACTACCGG GTGATGGTAC TGCGCTCTCT TTCTCCACGC
TTTGTGCTGC GCTACGGCAG CCAGGTCGTG GGGATTGAAA ACGGCAGTTA CGGGAAAGTC
ACCGTGGCGA ACGGCAGCAC CGTCTCACCG GATGTGAAAC TGGAGAGCAA ATGA
 
Protein sequence
MNKVLMCALL LTAASAWGAA TPRGSAYDSR MQNIPYNSQN TTVINTRAGY ITTLVFDADE 
EVITATAGFP QGWTITPDRN RVGISPAPVK QPVTDADGKT VQKIFTPTQQ DWQTNLFVTT
TKRDYSLMLN VIDNDREAGN LAFVVRFSYP DDTRRQNDAA RLARQQELQA AQEKERIQFA
LKKSTAPRNW NYTRRVAAGS ESITPDFAYD DGRFTYLGFS PQKLIPSPTV IVGGSEQVIT
PTFSTEGNYR VMVLRSLSPR FVLRYGSQVV GIENGSYGKV TVANGSTVSP DVKLESK