Gene SeSA_B0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0113 
Symbol 
ID6515184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp94833 
End bp95519 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID642745157 
ProductTriG protein 
Protein accessionYP_002112989 
Protein GI194733895 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC TTACCGCCAA AGCCCTGAGC GACTCGCGCT CGTTTGAGAA CGCCATTCTT 
GAGCGGGATA TGCGCATGAA AAAGGCGGGC TGGATCGTGG CGGCGCTCGC CGGTCTGCTG 
CTCGTCTTCG CCCTTGCCGC CCTTATCCTG CTGCTACCGC TCAAAACCAC CACCGTGGAG 
CTGTACACGC TCGACCGTCA GACCGGGCGC ATCGAGCGCG TCACCACCGT CGGCGAGGAC 
AAGCTGGACA CCTCCGAGGT GCTCAATCTC TCGCAGACTG CGTCCTACGT GAAGCGCCGC 
GAGGGGTACA ACTATTTCGC CCTTCAGCAG GACTACAGAG AGACGCAGAT GTTCAACAGC 
GACGAGGTCA ACAAGGAATA CCTCGACTGG TTTAACAGCC CGGACGCGCC GGACGCTGTG 
TTTCAGCAGG CGGCCTATGT AGTCACGGTG GAAGTCCTCT CCAACGTACC GTCAGAGGGC 
ACCGGCTCCA GCATGGTGGA GATGCTGCGC ATCAAGCGCA CCATTCGAAA GGTCAAGGAC 
AACACCGAAA CGTATGATTA CTGGACGGTG CGCATGACCT ACCGCTATTT CCCGCAGAAG 
AAAATGACGG CCTCCGAGCG CGAGGTGAAC CCGTTCGGCT TCATCGTCAC CAGTTACCAG 
CGGTTTAAGG AGAAAAGCGA TGAATAA
 
Protein sequence
MSELTAKALS DSRSFENAIL ERDMRMKKAG WIVAALAGLL LVFALAALIL LLPLKTTTVE 
LYTLDRQTGR IERVTTVGED KLDTSEVLNL SQTASYVKRR EGYNYFALQQ DYRETQMFNS 
DEVNKEYLDW FNSPDAPDAV FQQAAYVVTV EVLSNVPSEG TGSSMVEMLR IKRTIRKVKD 
NTETYDYWTV RMTYRYFPQK KMTASEREVN PFGFIVTSYQ RFKEKSDE