Gene SeSA_B0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0109 
Symbol 
ID6515155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp92586 
End bp93302 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content53% 
IMG OID642745153 
ProductTriD protein 
Protein accessionYP_002112985 
Protein GI194733862 
COG category 
COG ID 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AAACCACCCT GACGGCGCTG ACCGTCGCCT TGTGTCTCTT TCACGTCCCG 
GCTCAGGCCG GTATTCCCGT TTTTGATGAA GTAGCCAACG CCAGCAACAT CCAGCAGTGG 
GCGGAGAAGC TCCAGCAGTG GCAGCAGACG GTTCAACATT ATCAGTCGCA GATGAACGCT 
TATAAACAAC AGCTGGCAAC GGCCACCGGT ATTCGGGACG TCCAGGCATT CCTGAATCAG 
GCAAAAAACC TGACGGCTGA CATTAAAAAT CTGAAAAACA GGGGGATTTC CTTAAACGAT 
CTGTTAACCG GCTCAGGCGG GTCTTATGCT GGGGAACTAA ACAGGCTGTA TGACAAATAC 
AAACTGTTCG ACAACTGCCC GGAGAACGCC AGCGAGGCGT ACCGGGATAG CTGCAAACAG 
ATGCTCCTCA ATCAGGCGGT GTCCGTCGAG GACACTTCTG ACATCCAGGA AAAAATTTCC 
GACACGCTGA GCGATATTAG TAATCTCGCC AGTCGCATCG AGAATGCGAA GGACAGTAAA 
GAATCGCAGG ATCTGGCGAA CGTAGTGTCC GCGCGGAGTA TCCAGCTGAA CGCCCTGACC 
ACTCAATGGG AAATGTCGGT CAAACAAAGT GAGATGCGCA ACCAGCTGCT TGCCGAACAA 
CGCCGAAAGG CGCAGGCCGA GCAAATGCGC ACAGCTCCAA TCGCAGACCT TAACTAA
 
Protein sequence
MKLKTTLTAL TVALCLFHVP AQAGIPVFDE VANASNIQQW AEKLQQWQQT VQHYQSQMNA 
YKQQLATATG IRDVQAFLNQ AKNLTADIKN LKNRGISLND LLTGSGGSYA GELNRLYDKY 
KLFDNCPENA SEAYRDSCKQ MLLNQAVSVE DTSDIQEKIS DTLSDISNLA SRIENAKDSK 
ESQDLANVVS ARSIQLNALT TQWEMSVKQS EMRNQLLAEQ RRKAQAEQMR TAPIADLN