Gene SeSA_B0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0106 
Symbol 
ID6515230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp88835 
End bp89497 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID642745150 
Producttype IV secretory pathway VirB1 component 
Protein accessionYP_002112982 
Protein GI194733837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACCA CTGCCGCGTT GTTTCAGCTC GCAATGCAGT GTGCTCCCGC CGTTCACCCC 
GATACCATCC ACGACATCAC CCGCACCGAA TCCGGCTTAA ATCCATATGC CATCGCTGAG 
ATTGTCCCGG TAAAGGGCGG CAGGAGCCGC GTGATTTCTC ATCTGCCTTC GTCGAAAGAC 
GAGGCGCTAA AAATTGTGGA GGCCATAAAG CAGAAAAAGC ACCGTTATTC AGTAGGGCTG 
ATGCAGATAA CCAGCACCAA CTTCCCGCAG TTCGGCGTAA GCGCCGAATC CATGTTTAAC 
CCCTGTGACA ACATGACTGT TGCCGCGAAA ATCATCACCG ACTGCTATCA ACGAGGAGGA 
ACATTACAGC GCGCCCTGAG CTGCTATTAC TCAGGCAACT TTGAAACCGG CCAGCGCCCG 
GAAAGCGCGT TCGGCAACAC AAGCTACGTA CAGCGTATTG GCTACGTTGT GCCCTCAACG 
CGGGCAGAAC AGCAGACAGC ATCTCCCTCA TCCGGGGAAG CGCCTGCCGT CCCGTCCGAC 
AACACTGTTT ACCCGGATAG CGTCATACGC GGCGTAATTC CGGCACCCGA CACCACCCCG 
ACCAGCATCG CTGCTTATCC GCCACATGTC GTGCGCGGCG GCCTCGCTGT GTCTTCTGAT 
TAA
 
Protein sequence
MLTTAALFQL AMQCAPAVHP DTIHDITRTE SGLNPYAIAE IVPVKGGRSR VISHLPSSKD 
EALKIVEAIK QKKHRYSVGL MQITSTNFPQ FGVSAESMFN PCDNMTVAAK IITDCYQRGG 
TLQRALSCYY SGNFETGQRP ESAFGNTSYV QRIGYVVPST RAEQQTASPS SGEAPAVPSD 
NTVYPDSVIR GVIPAPDTTP TSIAAYPPHV VRGGLAVSSD