Gene SeSA_B0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0079 
Symbol 
ID6515114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp68933 
End bp70240 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content51% 
IMG OID642745126 
Producttransposase 
Protein accessionYP_002112958 
Protein GI194733825 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.776565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.783345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAAC GACTGAGCAA AATGATCAGT GATCTACTCC CTCCGGTGGA TTTAACGGAG 
TTGCTGCTCG AAATTAACGC CCATACCGGA TTTGCTGATG AGTTTTTCCA TGCTAGTGAA 
GCCAGTGCCA GAGTTGATGA TCTGCCCGTC AGCATCAGCG CCGTGCTGAT GGCTGAAGCC 
TGCAATATCG GTCTGGAACC ACTGATCAGA TCAAATGTTC CTGCACTGAC CCGACACCGG 
CTGAACTGGA CAAAAGCGAA CTATCTGCGG GCTGAAACTA TCACCAGCGC TAATGCCAGA 
CTGGTTGATT TTCAGGCAAC GCTGCCACTG GCACAGATAT GGGGTGGAGG AGAAGTGGCA 
TCTGCAGATG GAATGCGCTT TGTTACGCCA GTCAGAACAA TCAATGCCGG ACCGAACCGC 
AAATACTTTG GTAATAACAG AGGGATCACC TGGTACAACT TTGTGTCCGA TCAGTATTCC 
GGCTTTCATG GCATCGTTAT ACCGGGGACG CTGAGGGACT CTATCTTTGT GCTGGAAGGT 
CTTCTGGAAC AGGAGACCGG GCTGAATCCA ACCGAAATTA TGACCGATAC AGCAGGTGCC 
AGCGAACTTG TCTTTGGCCT TTTCTGGCTG CTGGGATACC AGTTTTCTCC ACGCCTGGCT 
GATGCCGGTG CTTCGGTTTT CTGGCGAATG GACCATGATG CCGACTATGG CGTGCTGAAT 
GATATTGCCA GAGGGCAATC AGATCCCCGA AAAATAGTCC TTCAGTGGGA CGAAATGATC 
CGGACCGCTG GCTCCCTGAA GCTGGGCAAA GTACAGGTTT CAGTGCTGGT CCGTTCATTG 
CTGAAAAGTG AACGTCCTTC CGGACTGACT CAGGCAATCA TTGAAGTGGG GCGCATCAAC 
AAAACGCTGT ATCTGCTTAA TTATATTGAT GATGAAGATT ACCGCCGGCG CATTCTGACC 
CAGCTTAATC GGGGAGAAAG TCGCCATGCC GTTGCCAGAG CCATCTGTCA CGGTCAAAAA 
GGTGAGATAA GAAAACGATA TACCGACGGT CAGGAAGATC AACTGGGCAC ACTGGGGCTG 
GTCACTAACG CCGTCGTGTT ATGGAACACT ATTTATATGC AGGCAGCCCT GGATCATCTC 
CGGGCGCAGG GTGAAACACT GAATGATGAA GATATCGCAC GCCTCTCCCC GCTTTGCCAC 
GGACATATCA ATATGCTCGG CCATTATTCC TTCACGCTGG CAGAACTGGT GACCAAAGGA 
CATCTGAGAC CATTAAAAGA GGCGTCAGAG GCAGAAAACG TTGCTTAA
 
Protein sequence
MPKRLSKMIS DLLPPVDLTE LLLEINAHTG FADEFFHASE ASARVDDLPV SISAVLMAEA 
CNIGLEPLIR SNVPALTRHR LNWTKANYLR AETITSANAR LVDFQATLPL AQIWGGGEVA 
SADGMRFVTP VRTINAGPNR KYFGNNRGIT WYNFVSDQYS GFHGIVIPGT LRDSIFVLEG 
LLEQETGLNP TEIMTDTAGA SELVFGLFWL LGYQFSPRLA DAGASVFWRM DHDADYGVLN 
DIARGQSDPR KIVLQWDEMI RTAGSLKLGK VQVSVLVRSL LKSERPSGLT QAIIEVGRIN 
KTLYLLNYID DEDYRRRILT QLNRGESRHA VARAICHGQK GEIRKRYTDG QEDQLGTLGL 
VTNAVVLWNT IYMQAALDHL RAQGETLNDE DIARLSPLCH GHINMLGHYS FTLAELVTKG 
HLRPLKEASE AENVA