Gene SeSA_B0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0055 
Symbol 
ID6515159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand
Start bp50555 
End bp51259 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID642745102 
ProductIS26 transposase 
Protein accessionYP_002112934 
Protein GI194733843 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.790344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAT TCAAAGGCCG GCATTTTCAG CGTGACATCA TTCTGTGGGC CGTACGCTGG 
TACTGCAAAT ACGGCATCAG TTACCGTGAG CTGCAGGAGA TGCTGGCTGA ACGCGGAGTG
AATGTCGATC ACTCCACGAT TTACCGCTGG GTTCAGCGTT ATGCGCCTGA AATGGAAAAA
CGGCTGCGCT GGTACTGGCG TAACCCTTCC GATCTTTGCC CGTGGCACAT GGATGAAACC
TACGTGAAGG TCAATGGCCG CTGGGCGTAT CTGTACCGGG CCGTCGACAG CCGGGGCCGC
ACTGTCGATT TTTATCTCTC CTCCCGTCGT AACAGCAAAG CTGCATACCG GTTTCTGGGT
AAAATCCTCA ACAACGTGAA GAAGTGGCAG ATCCCACGAT TCATCAACAC GGATAAAGCG
CCCGCCTATG GTCGCGCGCT TGCTCTGCTC AAACGCGAAG GCCGGTGCCC GTCTGACGTT
GAACACCGAC AGATTAAGTA CCGGAACAAC GTGATTGAAT GCGATCATGG CAAACTGAAA
CGGATAATCA ACGCCACGCT GGGATTTAAA TCCATGAAGA CGGCTTACGC CACCATCAAA
GGTATTGAGG TGATGCGTGC ACTACGCAAA GGCCAGGCCT CAGCATTTTA TTATGGTGAT
CCCCTGGGCG AAATGCGCCT GGTAAGCAGA GTTTTTGAAA TGTAA
 
Protein sequence
MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK 
RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR TVDFYLSSRR NSKAAYRFLG
KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK
RIINATLGFK SMKTAYATIK GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM