Gene SeSA_B0052 details

Gene Information

• Locus tag: SeSA_B0052
• ID: 6515231
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011092
• Strand: -
• Start bp: 46715
• End bp: 49681
• Gene Length: 2967 bp
• Protein Length: 988 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642745099
• Product: Tn3 family transposase
• Protein accession: YP_002112931
• Protein GI: 194733874
• COG category: [L] Replication, recombination and repair
• COG ID: [COG4644] Transposase and inactivated derivatives, TnpA family

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.469648
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCACGTC GTTCCATCCT GTCCGCCGCC GAGCGGGAAA GCCTGCTGGC GTTGCCGGAC 
TCCAAGGACG ACCTGATCCG ACATTACACA TTCAACGATA CCGACCTCTC GATCATCCGA 
CAGCGGCGCG GGCCAGCCAA TCGGCTGGGC TTCGCGGTGC AGCTCTGTTA CCTGCGCTTT 
CCCGGCGTCA TCCTGGGCGT CGATGAACTA CCGTTCCCGC CCTTGTTGAA GCTGGTCGCC 
GACCAGCTCA AGGTCGGCGT CGAAAGCTGG AACGAGTACG GCCAGCGGGA GCAGACCCGG 
CGCGAGCACC TGAGCGAGCT GCAAACCGTG TTCGGTTTCC GGCCCTTCAC CATGAGCCAT 
TACCGGCAGG CCGTCCAGAT GCTGACCGAG CTGGCGATGC AAACCGACAA AGGCATCGTG 
CTGGCCAGCG CCTTGATCGG GCACCTGCGG CGGCAGTCGG TCATTCTGCC CGCCCTCAAC 
GCCGTCGAGC GGGCGAGTGC CGAGGCGATC ACCCGTGCTA ACCGGCGCAT CTACGACGCC 
TTGGCCGAAC CACTGGCGGA CGCGCATCGC CGCCGCCTCG ACGATCTGCT CAAGCGCCGG 
GACAACGGCA AGACGACCTG GTTGGCTTGG TTGCGCCAGT CTCCGGCCAA GCCAAATTCG 
CGGCATATGC TGGAACACAT CGAACGCCTC AAGGCATGGC AGGCACTCGA TCTGCCTACC 
GGCATCGAGC GGCTGGTTCA CCAGAACCGC CTGCTCAAGA TTGCCCGCGA GGGCGGCCAG 
ATGACACCCG CCGACCTGGC CAAATTCGAG CCGCAACGGC GCTACGCCAC TCTCGTGGCG 
CTGGCCACCG AGGGCATGGC CACCGTCACC GACGAAATCA TCGACCTGCA CGACCGCATC 
CTGGGTAAGC TGTTTAACGC TGCCAAGAAT AAGCATCAGC AGCAGTTCCA GGCGTCAGGC 
AAGGCCATCA ACGCCAAGGT ACGTCTGTAC GGGCGCATCG GTCAGGCGCT GATCGACGCC 
AAGCAATCAG GCCGCGATGC GTTTGCCGCC ATCGAGGCCG TCATGTCCTG GGATTCCTTT 
GCCGAGAGCG TCACCGAGGC GCAGAAGCTC GCGCAACCCG ATGACTTCGA TTTCCTGCAT 
CGCATCGGCG AGAGCTACGC CACCCTGCGC CGCTATGCAC CGGAATTCCT TGCCGTGCTC 
AAGCTGCGGG CCGCGCCCGC CGCCAAAAAC GTGCTTGATG CCATTGAGGT GCTGCGCGGC 
ATGAACACCG ACAACGCCCG CAAGCTGCCA GCCGATGCAC CGACCGGCTT CATCAAGCCG 
CGCTGGCAGA AACTGGTGAT GACCGACGCC GGCATCGACC GGCGCTACTA CGAACTGTGC 
GCGCTGTCCG AGTTGAAGAA CTCCCTGCGC TCGGGCGACA TCTGGGTGCA GGGTTCACGC 
CAGTTCAAGG ACTTCGAGGA CTACCTGGTA CCGCCCGAGA AGTTCACCAG CCTCAAGCAG 
TCCAGCGAAT TGCCGCTGGC CGTGGCCACC GACTGCGAAC AATATCTGCA TGAGCGGCTG 
ACGCTGCTGG AAGCACAACT TGCCACCGTC AACCGCATGG CGGCAGCCAA CGACCTGCCG 
GATGCCATCA TCACCGAGTC GGGCTTGAAG ATCACGCCGC TGGATGCGGC GGTGCCCGAC 
ACCGCGCAGG CGCTGATAGA CCAGACAGCC ATGGTCCTGC CGCACGTCAA GATCACCGAA 
CTGCTGCTCG AAGTCGATGA GTGGACGGGC TTCACCCGGC ACTTCACGCA CTTGAAATCG 
GGCGATCTGG CCAAGGACAA GAACCTGTTG TTGACCACGA TCCTGGCCGA CGCGATCAAC 
CTGGGCCTGA CCAAGATGGC CGAGTCCTGC CCCGGCACGA CCTACGCGAA GCTCGCTTGG 
CTGCAAGCCT GGCATACCCG CGACGAAACG TACTCGACAG CGTTGGCTGA ACTGGTCAAC 
GCTCAGTTTC GGCATCCCTT TGCCGGGCAC TGGGGCGATG GCACCACATC ATCATCGGAC 
GGACAGAATT TCCGAACCGC TAGCAAGGCA AAGAGCACGG GGCACATCAA CCCAAAATAT 
GGCAGCAGCC CAGGACGGAC TTTCTACACC CACATCTCCG ACCAATACGC GCCATTCCAC 
ACCAAGGTGG TCAATGTCGG CCTGCGCGAC TCAACCTACG TGCTCGACGG CCTGCTGTAC 
CACGAATCCG ACCTGCGGAT CGAGGAGCAC TACACCGACA CGGCGGGCTT CACCGATCAC 
GTCTTCGCCC TGATGCACCT CTTGGGCTTC CGCTTCGCGC CGCGCATCCG CGACCTGGGC 
GACACCAAGC TCTACATCCC GAAGGGCGAT GCCGCCTATG ACGCGCTCAA GCCGATGATC 
GGCGGCATGC TCAACATCAA GCACGTCCGC GCCCATTGGG ACGAAATCCT GCGGCTGGCC 
ACCTCGATCA AGCAGGGCAC GGTGACGGCC TCGCTGATGC TCAGGAAACT CGGCAGCTAC 
CCGCGCCAGA ACGGCTTGGC CGTCGCGCTG CGCGAGTTGG GCCGCATCGA GCGCACGCTG 
TTCATCCTCG ACTGGCTGCA AAGCGTCGAG CTACGCCGCC GCGTGCATGC CGGGCTGAAC 
AAGGGCGAGG CGCGCAATGC GCTGGCCTGT GCCGTGTTCT TCAACCGCCT TGGTGAAATC 
CGTGACCGCA GTTTCGAGCA GCAGCGCTAC CGGGCCAGCG GCCTCAACCT GGTGACGGCG 
GCCATCGTGC TGTGGAACAC GGTCTACCTG GAGCGTGCGG CGCATGCGTT GCGCGGCAAT 
GGTCATGCCG TCGATGACTC GCTATTGCAG TACCTGTCGC CACTCGGCTG GGAGCACATC 
AACCTGACCG GTGATTACCT ATGGCGCAGC AGCGTCAAGA TCGGCGCGGG GAAGTTCAGG 
CCGCTACGGC CTCTGCAACC GGCTTAG 

 

Protein sequence

MPRRSILSAA ERESLLALPD SKDDLIRHYT FNDTDLSIIR QRRGPANRLG FAVQLCYLRF 
PGVILGVDEL PFPPLLKLVA DQLKVGVESW NEYGQREQTR REHLSELQTV FGFRPFTMSH 
YRQAVQMLTE LAMQTDKGIV LASALIGHLR RQSVILPALN AVERASAEAI TRANRRIYDA 
LAEPLADAHR RRLDDLLKRR DNGKTTWLAW LRQSPAKPNS RHMLEHIERL KAWQALDLPT 
GIERLVHQNR LLKIAREGGQ MTPADLAKFE PQRRYATLVA LATEGMATVT DEIIDLHDRI 
LGKLFNAAKN KHQQQFQASG KAINAKVRLY GRIGQALIDA KQSGRDAFAA IEAVMSWDSF 
AESVTEAQKL AQPDDFDFLH RIGESYATLR RYAPEFLAVL KLRAAPAAKN VLDAIEVLRG 
MNTDNARKLP ADAPTGFIKP RWQKLVMTDA GIDRRYYELC ALSELKNSLR SGDIWVQGSR 
QFKDFEDYLV PPEKFTSLKQ SSELPLAVAT DCEQYLHERL TLLEAQLATV NRMAAANDLP 
DAIITESGLK ITPLDAAVPD TAQALIDQTA MVLPHVKITE LLLEVDEWTG FTRHFTHLKS 
GDLAKDKNLL LTTILADAIN LGLTKMAESC PGTTYAKLAW LQAWHTRDET YSTALAELVN 
AQFRHPFAGH WGDGTTSSSD GQNFRTASKA KSTGHINPKY GSSPGRTFYT HISDQYAPFH 
TKVVNVGLRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFALMHLLGF RFAPRIRDLG 
DTKLYIPKGD AAYDALKPMI GGMLNIKHVR AHWDEILRLA TSIKQGTVTA SLMLRKLGSY 
PRQNGLAVAL RELGRIERTL FILDWLQSVE LRRRVHAGLN KGEARNALAC AVFFNRLGEI 
RDRSFEQQRY RASGLNLVTA AIVLWNTVYL ERAAHALRGN GHAVDDSLLQ YLSPLGWEHI 
NLTGDYLWRS SVKIGAGKFR PLRPLQPA