Gene SeSA_B0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0042 
Symbol 
ID6515152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand- 
Start bp40017 
End bp40724 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID642745090 
ProductUrf2 
Protein accessionYP_002112922 
Protein GI194733823 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.376924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.178432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTT CGCAGCCCGC CGGATGGACG GCGGCCGAGT TGGCGCAGGC GGCGGCGCGC 
GGACAGCTTG ACCTGCATTA CCAGCCGCTG GTCGATCTGC GCGATCACCG GATCGCTGGC 
GCGGAAGCGT TGATGCGCTG GCGGCATCCG AGGCTTGGCC TGTTGCCGCC CGGCCAGTTC 
CTGCCGCTGG CCGAGTCGTT CGGCCTGATG CCGGAAATAG GCGCGTGGGT GCTGGGCGAG 
GCCTGTCGCC AGATGCACAA GTGGCAAGGA CCGGCATGGC AACCGTTCCG TCTTGCCATC 
AATGTGTCCG CCAGCCAGGT TGGGCCAACG TTCGACGACG AGGTAAAGCG GGTGCTGGCC 
GATATGGCCC TGCCCGCCGA GCTTCTGGAG ATCGAACTGA CCGAATCGGT CGCATTCGGC 
AATCCAGCCC TGTTCGCCAG TTTCGACGCC TTGCGCGCCA TCGGCGTGCG CTTCGCCGCC 
GACGACTTCG GCACCGGCTA TTCCTGCCTG CAACATCTGA AATGCTGCCC CATCACCACA 
TTGAAAATCG ACCAATCCTT TGTCGCCAGG CTCCCGGATG ATGCCCGTGA CCAAACTATC 
GTGCGGGCGG TGATCCAGCT CGCGCACGGG CTGGGCATGG ATGTCATTTT CAGAAGACGA 
CTGCACCAGT TGATTGGGCG TAATGGCTGT TGTGCAGCCA GCTCCTGA
 
Protein sequence
MTSSQPAGWT AAELAQAAAR GQLDLHYQPL VDLRDHRIAG AEALMRWRHP RLGLLPPGQF 
LPLAESFGLM PEIGAWVLGE ACRQMHKWQG PAWQPFRLAI NVSASQVGPT FDDEVKRVLA 
DMALPAELLE IELTESVAFG NPALFASFDA LRAIGVRFAA DDFGTGYSCL QHLKCCPITT 
LKIDQSFVAR LPDDARDQTI VRAVIQLAHG LGMDVIFRRR LHQLIGRNGC CAASS