Gene SeSA_B0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0039 
Symbol 
ID6515182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand- 
Start bp37387 
End bp37866 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID642745087 
Productintegrase/recombinase 
Protein accessionYP_002112919 
Protein GI194733804 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02249] integron integrase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.333737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCCG AGAGCTTGGC ACCCAGCCTG CGCGAGCAGC TGTCGCGTGC ACGGGCATGG 
TGGCTGAAGG ACCAGGCCGA GGGCCGCAGC GGCGTTGCGC TTCCCGACGC CCTTGAGCGG 
AAGTATCCGC GCGCCGGGCA TTCCTGGCCG TGGTTCTGGG TTTTTGCGCA GCACACGCAT 
TCGACCGATC CACGGAGCGG TGTCGTGCGT CGCCATCACA TGTATGACCA GACCTTTCAG 
CGCGCCTTCA AACGTGCCGT AGAACAAGCA GGCATCACGA AGCCCGCCAC ACCGCACACC 
CTCCGCCACT CGTTCGCGAC GGCCTTGCTC CGCAGCGGTT ACGACATTCG AACCGTGCAG 
GATCTGCTCG GCCATTCCGA CGTCTCTACG ACGATGATTT ACACGCATGT GCTGAAAGTT 
GGCGGTGCCG GAGTGCGCTC ACCGCTTGAT GCGCTGCCGC CCCTCACTAG TGAGAGGTAG
 
Protein sequence
MLPESLAPSL REQLSRARAW WLKDQAEGRS GVALPDALER KYPRAGHSWP WFWVFAQHTH 
STDPRSGVVR RHHMYDQTFQ RAFKRAVEQA GITKPATPHT LRHSFATALL RSGYDIRTVQ 
DLLGHSDVST TMIYTHVLKV GGAGVRSPLD ALPPLTSER