Gene SeSA_B0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0031 
Symbol 
ID6515176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand
Start bp29333 
End bp30217 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content59% 
IMG OID642745079 
Productdrug/metabolite transporter 
Protein accessionYP_002112911 
Protein GI194733776 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID[TIGR00950] Carboxylate/Amino Acid/Amine Transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.6822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.556158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC GCACGCCCGA TTTATTGTTC ACAGCGATAG CACCTGCCAT TTGGGGCAGC 
ACCTACATTG TCACCACCCA ATACCTGCCG AACTTCTCAC CGATGACGGT CGCGATGCTG
CGGGCGTTGC CGGCGGGTTT ATTGCTCGTG ATGATCGTCC GACAGATTCC AACGGGAATC
TGGTGGATGC GCATCTTCAT CCTCGGCGCA CTTAATATTT CGCTATTCTG GAGCTTGTTG
TTTATTTCGG TCTACCGCCT GCCGGGCGGG GTCGCGGCGA CGGTAGGCGC TGTGCAGCCG
CTGATGGTCG TGTTCATCTC TGCCGCTCTG CTAGGTAGCC CGATACGATT GATGGCGGTC
CTGGGGGCTA TTTGCGGAAC TGCGGGCGTG GCGCTGTTGG TGTTGACACC AAACGCAGCG
CTAGATCCTG TCGGCGTCGC AGCGGGCCTG GCGGGGGCGG TTTCCATGGC GTTCGGAACC
GTGCTGACCC GCAAGTGGCA ACCTCCCGTG CCTCTGCTCA CCTTTACCGC CTGGCAACTG
GCGGCCGGAG GACTTCTGCT CGTTCCAGTA GCTTTAGTGT TTGATCCGCC AATCCCGATG
CCTACAGGAA CCAATGTTCT CGGCCTGGCG TGGCTCGGCC TGATCGGAGC GGGTTTAACC
TACTTCCTTT GGTTCCGGGG GATCTCGCGA CTCGAACCTA CAGTTGTTTC CTTACTGGGC
TTTCTCAGCC CGGGGACCGC CGTGTTGCTA GGATGGTTGT TCTTGGATCA GACGCTGAGT
GCGCTTCAAA TCATCGGCGT CCTGCTCGTG ATCGGGAGTA TCTGGCTGGG CCAACGTTCC
AACCGCACTC CTAGGGCGCG TATAGCTTGC CGGAAGTCGC CTTGA
 
Protein sequence
MSLRTPDLLF TAIAPAIWGS TYIVTTQYLP NFSPMTVAML RALPAGLLLV MIVRQIPTGI 
WWMRIFILGA LNISLFWSLL FISVYRLPGG VAATVGAVQP LMVVFISAAL LGSPIRLMAV
LGAICGTAGV ALLVLTPNAA LDPVGVAAGL AGAVSMAFGT VLTRKWQPPV PLLTFTAWQL
AAGGLLLVPV ALVFDPPIPM PTGTNVLGLA WLGLIGAGLT YFLWFRGISR LEPTVVSLLG
FLSPGTAVLL GWLFLDQTLS ALQIIGVLLV IGSIWLGQRS NRTPRARIAC RKSP