Gene SeSA_B0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0012 
Symbol 
ID6515234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp9974 
End bp10933 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content59% 
IMG OID642745062 
Productputative pathogenicity island protein 
Protein accessionYP_002112894 
Protein GI194733838 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA AACCTGTGCT CGGTATTAGC GGATGTTTGA CCGGGTCTGC CGTTCGCTTC 
GACGGCGGAC ACAAGCGTAT GGGCTTTGTC ATGGATGAAC TGGCCCAGTG GGTGAGTTTC 
AGGCCCGTCT GCCCGGAAAT GGCGATTGGC CTGCCGACGC CACGCCCGGC CATACGCCTG 
ACGCTGACGG ACAGCGGCGA AACGCAGCTC CGCTTCAGCA AGCCGCCCCA TGATGATATA 
ACGCAGAAAA TGGCCGACTT TACGGCGGAC TATCTGCCAA AAATCGGCGA TCTGTCGGGA 
TTTATCGTCT GCGCGAAATC GCCAAGCTGC GGCATGGAAC GCGTGCGGCT ATATGATGAA 
AACGGCAACC GGGGCCGCAA GGAGGGTGTC GGGCTGTTCA CCGCCGCCCT GCTTGAAACC 
TACCCGTGGC TGCCCGTGGA GGAAGACGGT CGGCTGCACG CCCCGGTGCT GCGGGAAAAC 
TTTATCGAGC GGGTATTTGC CCTGCACGAG CTGAACACGC TGCGCGCTAA AGGCCTGACG 
CGCCGCGCGC TGCTGGATTT CCACAGCCGC TATAAATTGC AGCTTCTGGC GCACCATCAG 
GCGGGCTACC GCGAGATTGG CCCGTTCGTT GCGTCGCTGC ATGAATGGGA AGATCTGGAC 
GCGTTCTTCG TGGCGTACCG CGAAAAGCTG ATGACCATCC TGAAAAAGCC CGCCTCGCGG 
AAAAACCATA CCAACGTGCT AATGCATATC CAGGGCTATT TCCGTAACCA GCTGAACAGC 
CGCCAGCGCG TCGAGCTGCG CGATGTGATC CTGCACTATC GCGACGGGCT GCTACCCATC 
CTCGCGCCGT TGACGCTACT GAAACACTAC ATGGCCGAAT ACCCTGACCG GTATCTGATG 
ACGCAAAACT ACTTTGATCC CTATCCTGAT GATTTGGGTC TGCGTCTGGC AGTAACCTGA
 
Protein sequence
MTTKPVLGIS GCLTGSAVRF DGGHKRMGFV MDELAQWVSF RPVCPEMAIG LPTPRPAIRL 
TLTDSGETQL RFSKPPHDDI TQKMADFTAD YLPKIGDLSG FIVCAKSPSC GMERVRLYDE 
NGNRGRKEGV GLFTAALLET YPWLPVEEDG RLHAPVLREN FIERVFALHE LNTLRAKGLT 
RRALLDFHSR YKLQLLAHHQ AGYREIGPFV ASLHEWEDLD AFFVAYREKL MTILKKPASR 
KNHTNVLMHI QGYFRNQLNS RQRVELRDVI LHYRDGLLPI LAPLTLLKHY MAEYPDRYLM 
TQNYFDPYPD DLGLRLAVT