| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_B0006 |
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| Symbol | sopB |
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| ID | 6515222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011092 |
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| Strand | - |
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| Start bp | 3496 |
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| End bp | 4467 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642745056 |
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| Product | plasmid-partitioning protein |
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| Protein accession | YP_002112888 |
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| Protein GI | 194733850 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTG CTCCTGTCAT TCCAAGACAT ACCACACATA GTCAATCGAC TGAAGATACT
TCATCACCGG CGCCGGCCGC GCCGATGGTG GATTCATTAA TTGCGCGCGT GGGTGCTATG
GCCCGCGGTA ATGCAATCTC TCTTCCGGTA TGTGGACGGG AAGTGAAATT TACCCTTGAG
GTGCTCCGGG GAGACTCTGT TGAGAGCGCT TCACGCGTAT GGTCAGGCAA TGAGCGCGAT
CAGGAACTAC TTACCGAAGA TGCTCTGGAT GATCTCATTC CTTCATTTTT ACTGACCGGT
CAGCAGACTC CAGCTTTCGG CCGCCGGGTT TCTGATGTCA TAGAAATTGC CGACGGCAGC
CGTCGCCGTA AAGCCGCAAT CCTGACGGAA AGTGATTATC GCGTTCTGGT TGGTGAACTG
GACGATGAGC AGATGGCTGC ATTGTCCCGA CTGGGTAACG ATTATCGGCC GACGAGTGCT
TATGAACGTG GCCTGCGTTA TACAAGCCGG CTGCAGAATG AGTTTGCAGG AAATATTTCT
GCGCTTGCCG ATGCGGAAAA CATCTCTCGT AAGATCATTA CCCGCTGTAT CAATACGGCC
AAATTGCCTA AATCCGTTGT TGCCCTGTTT GCACATCCTG GAGAACTGTC TGCCCGGTCA
GGTGAAGCCC TTCAGAAGGC TTTTGCAGAT AAAGAAGAAT TACTGAAGCA GCAGGCTGAG
ACTCTCCACG ATCAGAAGAA AGCGGGACTA ATCTTTGAAG CTGAAGAGGT CATTAGTCTT
TTAACATCCG TACTGAAACA ATCTCCCGCA TCAAGAGTTA ATCTGAGCTC ACGTCATCAG
TTTGCTCCAG GGGCAACAGC ATTGTATAAG GGCGATAAAA TGGTGCTTAA CCTGGATAGG
TCCCGCATTC CTGCGGAGTG TATAGAGAAA ATAGAAGCCA TTCTTAAGGA GCTTGAGAAA
CCAGGAGTCT GA
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| Protein sequence | MKRAPVIPRH TTHSQSTEDT SSPAPAAPMV DSLIARVGAM ARGNAISLPV CGREVKFTLE
VLRGDSVESA SRVWSGNERD QELLTEDALD DLIPSFLLTG QQTPAFGRRV SDVIEIADGS
RRRKAAILTE SDYRVLVGEL DDEQMAALSR LGNDYRPTSA YERGLRYTSR LQNEFAGNIS
ALADAENISR KIITRCINTA KLPKSVVALF AHPGELSARS GEALQKAFAD KEELLKQQAE
TLHDQKKAGL IFEAEEVISL LTSVLKQSPA SRVNLSSRHQ FAPGATALYK GDKMVLNLDR
SRIPAECIEK IEAILKELEK PGV
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