| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C5009 |
|---|
| Symbol | |
|---|
| ID | 6489835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4888058 |
|---|
| End bp | 4888744 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642745050 |
|---|
| Product | putative RNA methyltransferase |
|---|
| Protein accession | YP_002048619 |
|---|
| Protein GI | 194450554 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 0.954337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTAA CAATCGTTCT TGTCGCTCCC GCCAGAGCGG AAAATATCGG CGCAGCCGCC
CGGGCAATGA AGACCATGGG ATGTACTGAC CTGCGTATTG TCGACAGCCA GGCGCACCTG
GAGCCCGCCA CCCGTTGGGT CGCACATGGA TCTGGAGATA TTATTGATAA TATTGAGGTT
TTCCACACCC TTGTCGACGC GCTCCACGAT GTGGATTTTA CCGTAGCGAC GACAGCCCGC
AGCCGGGCAA AATTTCATTA CTACGCTTCG CCCGCTGAAC TGGTTCCCTT ATTACAGGAA
AAATCACGCT GGATGCGTCA TGCCGCGCTG GTTTTTGGCC GTGAGGATTC CGGTCTGACC
AATGACGAGC TGGCGCTGGC GGATGTATTG ACCGGCGTGC CGATGGCGGC GGATTACCCT
TCGCTCAATC TGGGTCAGGC GGTCATGGTG TATTGCTATC AATTAGCAGG TTTAATGCAA
CAGACCACTG AATCCGTTGA TATTGCTGAT GAATCGCAGT TACAGGCGTT ACGCGCGCGC
CTTTTACGCC TGCTAACGAC TCTGGAGGCG GCTGATGACC ACAAATTAAC CGACTGGCTA
CAACAGCGAA TCGGCCTGCT GGGACAGCGA GATACGGTAA TGTTGCACCG TTTGGTTCAT
GATATTGAAA AAAAACTAAC AAAATAA
|
|---|
| Protein sequence | MRVTIVLVAP ARAENIGAAA RAMKTMGCTD LRIVDSQAHL EPATRWVAHG SGDIIDNIEV
FHTLVDALHD VDFTVATTAR SRAKFHYYAS PAELVPLLQE KSRWMRHAAL VFGREDSGLT
NDELALADVL TGVPMAADYP SLNLGQAVMV YCYQLAGLMQ QTTESVDIAD ESQLQALRAR
LLRLLTTLEA ADDHKLTDWL QQRIGLLGQR DTVMLHRLVH DIEKKLTK
|
|---|
| |