Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C5002 |
Symbol | |
ID | 6488461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4880273 |
End bp | 4880830 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642745044 |
Product | putative fimbrial subunit |
Protein accession | YP_002048613 |
Protein GI | 194447572 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.698647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGA ACAGATTTGC TGCATTAGCC GCCCTGTTAA CGTTCACGGG TCTGGCATTA TGGTCGCCCT CGATCAGCGC GGCATACAAT ACCGCAGATG CCGTAGACAT TAACGTTACG GGATTAATTT ATGCCGATCC GTGTACCGTG ACGGTCCCCG ACACGCTCTC TCTTGGACAA TATGCCCGGG CGGATATCGC CGTGGCCGGT GGCAATACCG CCACCATTCC TTTCACCATA AAAATGACGA ATTGCCCGGC AACGACCACA AAAGCCGCGA TTTCATTTAA CGGCGTACCT TATCCCGATC CAAATTATGC TTCTGCGATT TATGCAAACA GCGCGGCCAA TCCGGCGCAG GATTTAGGAT TACAGCTTTT TAACCTGGAC GGCAAAAGTC TGGTCAATCT GGCCAACAAC GTCACTTACA CGGTGGATAT CAACAGTAAT ACCCATGAAG CCAATTTGCC TGTCGCCGCA AGGATGTATA CCCCGTATGG AAAAGTCACG GCAGGGGATT TCACGTCCGT TGTGACGATC ACTATCGCAT GGCAATAA
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Protein sequence | MNMNRFAALA ALLTFTGLAL WSPSISAAYN TADAVDINVT GLIYADPCTV TVPDTLSLGQ YARADIAVAG GNTATIPFTI KMTNCPATTT KAAISFNGVP YPDPNYASAI YANSAANPAQ DLGLQLFNLD GKSLVNLANN VTYTVDINSN THEANLPVAA RMYTPYGKVT AGDFTSVVTI TIAWQ
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