Gene SeHA_C5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C5000 
Symbol 
ID6492070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4877740 
End bp4879089 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content54% 
IMG OID642745042 
Producthypothetical protein 
Protein accessionYP_002048611 
Protein GI194448967 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAT CCCCCCTGTT GTGGAAAATG ATTACGTTAG GCGGCGCCAT GATCCTGCTG 
TTAATTCCCC TGATGATGGT ACGGCACACC ATCGTGGAAC GTGCTGATTA TCGAAGCCAT
GTAGAAGCCG CTATTCGTCA GAGTACCAGC GGCCCGCAAA AGGTTGTCGG CCCGCTGGTG
GCGGTTCCGG TGACAGAGCT CTATACCGTG CTGGAAGAGG AGAAAGAGGT CCAGTATAAG
CGCAGTTATC TCTATTTTTG GCTGCCGGAG TCGCTATTGG TCGAAGGCAA TCAAAACGTT
GAAGCGCGAA AAATAGGTAT TTATCAGGGG CAGGTGTGGC ATACCGATAT GGCGATAAAG
GCGGAGTTTG ATGTGGCCCG TCTGCATGAG CTGAACAGAC CGAACATTAC CCTTGGAAAG
CCCTTTATCG TCGTGGGCGT CGGCGATGCG CGCGGTATCA GCGCAGTAAA AGCGCCGCAG
GTGAATGGTG AAACGCTCAC TGTAGAACCG GGGACCGGCT TACCGGAAAG TAGAGAGGGC
ATTCATATCC CGCTGCCGGA CAGTCAGTGG GCGACGCGCA ACCTGACGTT GGCGATGTCG
TTAAATTTAA GCGGAACCGG CAGCTTTTCA CTGGTTCCCG TCGGGCGTAG CAGTGAAATG
ACCCTGACCA GTAACTGGCC GCACCCAAAT TTTGTGGGGG ATTTTCTTCC CGGTAAACGC
GAAATCAGCG GTTCAGGATT TCAGGCCCAG TGGCAAACCA GCCGGTTTGC CACGAATCTC
GGCGAACAGT TTGCTGATGC GCAAAAGGTG GATTGGGACA ACTTACCAGC GTTTAGCGTC
GCTGTATCGA CGCCAGCCGA CCAGTATCAA CTGACGGACA GAGCGACGAA ATATGCCATT
TTGTTGATTA CGCTAACGTT TATGGCTTTC TTTGTCTTCG AAACCCTGAC GGGGCAGCGG
TTACACCCGA TGCAGTATCT GCTGGTGGGG TTATCGCTGG TGATGTTCTA CCTGCTGTTG
CTGGCACTGT CGGAACATAT CGGTTTCACG CCAGCCTGGA TCGCCGCCAG CCTGGTGGGC
GCGTTGATGA ATAGCGTTTA TTTGCAGGCG GTGCTGAAAG GATGGCGCAA TAGCGTGCTG
TTTACGTTAG CGTTATTGGC GCTGGATGGC GTGATGTGGG GATTGCTGCG TTCGGAAGAT
AGCTCGTTGC TTCTGGGTAC CGGCGTTCTG CTACTGGCGC TTGGCGGCGT GATGTTCCTG
ACGCGCCATC TGGACTGGTA TTCGCTCTCT TGTCAGCAAC GTAAGTCATT ACCGCCAGTA
CAAGATGACG AATTACGTTT GTGGAAATAA
 
Protein sequence
MLKSPLLWKM ITLGGAMILL LIPLMMVRHT IVERADYRSH VEAAIRQSTS GPQKVVGPLV 
AVPVTELYTV LEEEKEVQYK RSYLYFWLPE SLLVEGNQNV EARKIGIYQG QVWHTDMAIK
AEFDVARLHE LNRPNITLGK PFIVVGVGDA RGISAVKAPQ VNGETLTVEP GTGLPESREG
IHIPLPDSQW ATRNLTLAMS LNLSGTGSFS LVPVGRSSEM TLTSNWPHPN FVGDFLPGKR
EISGSGFQAQ WQTSRFATNL GEQFADAQKV DWDNLPAFSV AVSTPADQYQ LTDRATKYAI
LLITLTFMAF FVFETLTGQR LHPMQYLLVG LSLVMFYLLL LALSEHIGFT PAWIAASLVG
ALMNSVYLQA VLKGWRNSVL FTLALLALDG VMWGLLRSED SSLLLGTGVL LLALGGVMFL
TRHLDWYSLS CQQRKSLPPV QDDELRLWK