Gene SeHA_C4998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4998 
Symbol 
ID6489383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4875569 
End bp4876258 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID642745040 
ProductDNA-binding response regulator CreB 
Protein accessionYP_002048609 
Protein GI194449382 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.866584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC CGCAGGTCTG GTTAGTCGAG GATGAACAGG GAATCGCCGA TACGCTCATC 
TACACCCTGC AACTGGAAGG GTTTACCGTT GAGCTATTCG CTCGCGGGCT GCCCGCGCTG
GAAAAAGCGC GTCAGCAACG GCCGGATGCG GTGATTCTCG ATGTGGGACT ACCGGATATC
AGCGGCTTTG AGCTGTGTCG GCAGTTGCTG GAACGCCATC CTGCGCTGCC GATTCTTTTC
CTGACTGCCC GTAGCGATGA AGTGGATCGA TTGCTTGGTC TGGAGATCGG TGCAGATGAT
TATGTCGCCA AGCCGTTCTC GCCGCGCGAA GTGAGCGCCC GCGTGCGCAC GCTGCTGCGC
CGGGTGAAAA AGTTTGCTGC GCCGTCGCCG GTGGTGCGTA CCGGACATTT TGAACTCAAT
GAACCGGCGG CGCAGATCGC CTGGTTTGGT ACGCCGCTCT CGCTGACGCG TTATGAGTTT
CTGCTTCTTA AAACCCTGCT GCTGTCGCCG GAGCGCGTGT ACTCGCGTCA GCAATTGATG
GATATTGTCT GGTCTGATGC CCAGGAGACC TTCGATCGGA CGGTCGATAC ACACATCAAA
ACCCTGCACG CTAAGCTACG CGCGATCAAC CCGGATCTCT CGCCAATTAA CACGCATCGT
GGAATGGGAT ACAGCCTGAG GAGCGTCTGA
 
Protein sequence
MQQPQVWLVE DEQGIADTLI YTLQLEGFTV ELFARGLPAL EKARQQRPDA VILDVGLPDI 
SGFELCRQLL ERHPALPILF LTARSDEVDR LLGLEIGADD YVAKPFSPRE VSARVRTLLR
RVKKFAAPSP VVRTGHFELN EPAAQIAWFG TPLSLTRYEF LLLKTLLLSP ERVYSRQQLM
DIVWSDAQET FDRTVDTHIK TLHAKLRAIN PDLSPINTHR GMGYSLRSV