Gene SeHA_C4996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4996 
Symbolrob 
ID6489273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4874002 
End bp4874871 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID642745038 
Productright origin-binding protein 
Protein accessionYP_002048607 
Protein GI194450174 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGG CTGGCATAAT TCGCGACCTG TTAATCTGGC TGGAAGGTCA TCTGGATCAG 
CCGCTGTCAC TTGACAATGT GGCGGCAAAA GCAGGCTATT CCAAGTGGCA CCTGCAGAGA
ATGTTTAAGG ACGTGACGGG CCACGCCATT GGCGCTTACA TCCGCGCCCG TCGTTTATCG
AAATCAGCAG TGGCGCTGCG TTTGACCGCG CGTCCAATTC TGGATATTGC TCTTCAGTAC
CGCTTCGATT CTCAGCAAAC CTTTACGCGC GCCTTTAAGA AACAGTTTTC CCAGACGCCA
GCGCTGTATC GTCGCTCCTC GGAATGGAGC GCCTTTGGCA TTCGCCCGCC ATTACGGCTG
GGCGAGTTTA CCGTGCCGGA ACATCAGTTC GTTACGCTGG AAGATACGCC GCTCCTTGGC
GTCACGCAGA GCTATTCCTG CTCGCTGGAA CAGATTTCCG ACTTCCGCCA CGAAATGCGC
GTGCAATTCT GGCATGATTT CCTCGGTCAT TCGCCAACTA TTCCGCCAGT GCTTTATGGG
CTTAATGAAA CGCGCCCCAG CATGGAGAAA GACGATGAGC AGGAAGTATT CTATACCACC
GCACTGCCGC AAGAGCAGGC CGATGGCTAT GTTCAGTCGG CGCATCCTGT GCTGTTGCAG
GGCGGTGAAT ACGTCATGTT CACCTATGAA GGGTTAGGAA CCGGCGTGCA GGATTTTATC
CTGACCGTTT ACGGCACCTG TATGCCAATG CTGAATCTGA CCCGTCGTAA AGGGCAGGAT
ATAGAGCGAT ACTATCCGTC AGAAGATACC AAAACCGGCG ATCGCCCTAT CAACCTGCGC
TGCGAATTTC TGATCCCGAT TCGCCGTTAA
 
Protein sequence
MDQAGIIRDL LIWLEGHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GAYIRARRLS 
KSAVALRLTA RPILDIALQY RFDSQQTFTR AFKKQFSQTP ALYRRSSEWS AFGIRPPLRL
GEFTVPEHQF VTLEDTPLLG VTQSYSCSLE QISDFRHEMR VQFWHDFLGH SPTIPPVLYG
LNETRPSMEK DDEQEVFYTT ALPQEQADGY VQSAHPVLLQ GGEYVMFTYE GLGTGVQDFI
LTVYGTCMPM LNLTRRKGQD IERYYPSEDT KTGDRPINLR CEFLIPIRR