Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4992 |
Symbol | |
ID | 6492283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4870371 |
End bp | 4872308 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642745034 |
Product | lytic murein transglycosylase |
Protein accession | YP_002048603 |
Protein GI | 194447510 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 0.971097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAGAG CCAAACCATT TGTCTGGCGT CTCGTCGCCG CCAGCGTATG CCTGCTGACC TTTTGTCACC TCGCGCGGGC CGACTCACTG GAAGAGCAGC GTAACCGCTA TGCGCAGATT AAGCAGGCCT GGGACAACCG CCAGATGGAT GTGGTAGAGC AGATGATGCC GGGTCTGAAA GATTATCCGC TCTACCCGTA TCTGGAATAC CGTAAGATCA CCGACGATTT GATGAACCAA CCGGCGATTG TCGTCACGCA GTTTGTGCGC GCCAATCCTA CGCTTCCGCC TGCGCGTACG CTGCAATCAC GCTTCGTCAA TGAGCTGGCG CGTCGTGAAG ACTGGCGCGG CTTGCTGGCG TTTAGCCCGG AGAAACCCGG CACCACGGAA GCGCAATGTA ACTATTACTA CGCGAAATGG AGTACCGGGC AAACGGAAGC GGCCTGGCAG GGCGCGAAAG ACCTTTGGCT GACCGGCAAA AGTCAGCCGA ATGCCTGCGA TAAACTGTTC AGCGTCTGGC GGGCCTCCGG CAAGCAAGAC CCGCTGGCGT ACCTGGAACG TATTCGGCTG GCGATGAAAG CCGGGAATAC GGGTTTGGTT ACGGTGCTGG CCGGACAGAT GCCGGCGGAA TATCAAACGA TCGCCTCAGC GATCATTACC CTGGCTAATG ACCCTAATAA CGTGTTGACC TTCGCACGCA CCACCGGCGC CACCGATTTT ACCCGCCAGA TGGCGGAAGT CGCGTTTGCC AGCGTCGCCC GCCAGGACGC GGAAAATGCG CGTCTGATGA TCCCCTCGCT GGTACAGGCG CAGAAACTTA ATGAGGAACA AACGCAGGCG CTGCGCGATA TCGTTGCCTG GCGACTGATA GGCAACGATG TGACCGATGC GCAAGCGAAA TGGCGCGATG ACGCGATTAT GCGCTCGCAA TCGACGTCGC TTATCGAGCG GCGCGTGCGT ATGGCGCTGG GGATGGGCGA TCGTCGCGGT CTCAATACCT GGCTTGCCCG ACTGCCAATG GAGGCGAAAG AGAAAGACGA GTGGCGTTAC TGGCAGGCGG ATTTATTGCT GGAACGCGGT CGTGACGCCG AAGCGAAAGA GATCCTTCAT GCTTTAATGC AGAAGCGCGG TTTTTATCCG ATGGTTGCGG CACAGCGTTT AGGCGAAGAG TACACGCTTA AAATCGATAA AGCGCCCGCC AACGTAAACA GCGCGTTGAC GCAGGGGCCG GAGATGGCGC GTGTACGGGA GCTAATGTAC TGGAACCTGG ATAACACGGC GCGCAGCGAA TGGGCGAATC TGGTAAAAAG CCGTAGTAAA TCTGAACAGG CGCAACTGGC GCGCTATGCG TTTAACCAGC ACTGGTGGGA TCTGAGCGTA CAGGCGACGA TCGCCGGAAA ACTGTGGGAT CATCTGGAGG AGCGTTTCCC GCTGGCGTAT AACGATCTTT TTACCCGCTA TACCCGCGGA AAAGATATCT CACAAAGCTA TGCCATGGCG ATTGCCCGCC AGGAGAGCGC CTGGAACCCG AAAGTAAAAT CACCGGTAGG GGCCAGCGGT TTAATGCAGA TTATGCCGGG AACGGCCACC CATACGGTGA AAATGTTTTC GATTCCGGAC TACCGCGGCC CCGGCCAACT GCTGGAGCCG GAGACCAACA TCAACATTGG CACCAGCTAT TTGCAGTATG TCTATCAGCA GTTTGGTAAT AACCGTATTT TCGCCTCGGC GGCGTATAAC GCCGGGCCGG GGCGCGTGCG CACCTGGCTT GGCAATAGCG CCGGGCGTAT CGATGCCGTA GCGTTTGTCG AAAGCATTCC CTTTTCGGAA ACGCGCGGCT ACGTGAAAAA CGTTCTGGCC TATGACGCTT ACTATCGCCA CTTTATGGGG CAGAAAGAGG CCTTAATGAG CGACTCTGAG TGGCAGCGAC GGTATTAA
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Protein sequence | MDRAKPFVWR LVAASVCLLT FCHLARADSL EEQRNRYAQI KQAWDNRQMD VVEQMMPGLK DYPLYPYLEY RKITDDLMNQ PAIVVTQFVR ANPTLPPART LQSRFVNELA RREDWRGLLA FSPEKPGTTE AQCNYYYAKW STGQTEAAWQ GAKDLWLTGK SQPNACDKLF SVWRASGKQD PLAYLERIRL AMKAGNTGLV TVLAGQMPAE YQTIASAIIT LANDPNNVLT FARTTGATDF TRQMAEVAFA SVARQDAENA RLMIPSLVQA QKLNEEQTQA LRDIVAWRLI GNDVTDAQAK WRDDAIMRSQ STSLIERRVR MALGMGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG RDAEAKEILH ALMQKRGFYP MVAAQRLGEE YTLKIDKAPA NVNSALTQGP EMARVRELMY WNLDNTARSE WANLVKSRSK SEQAQLARYA FNQHWWDLSV QATIAGKLWD HLEERFPLAY NDLFTRYTRG KDISQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPD YRGPGQLLEP ETNINIGTSY LQYVYQQFGN NRIFASAAYN AGPGRVRTWL GNSAGRIDAV AFVESIPFSE TRGYVKNVLA YDAYYRHFMG QKEALMSDSE WQRRY
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