Gene SeHA_C4972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4972 
Symbol 
ID6489307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4849326 
End bp4850099 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID642745015 
Productputative deoxyribonuclease YjjV 
Protein accessionYP_002048584 
Protein GI194448325 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGGC GCTTTATCGA TACACACTGC CATTTTGATT TCCCGCCCTT TACGGGCGAT 
GAGCGCGCCA GTATTCAGCG TGCGTGTGAG GCGGGCGTTG AAAAAATCAT CGTGCCGGCG
ACCGAGGCGG CTCACTTTCC CCGCGTGCTG GCGCTGGCGG CGCGTTTCCC GTCGCTTTAT
GCTGCGCTGG GATTGCACCC CATTGTGATT GAGCGTCATG CCGATGACGA TCCTGATAAG
CTGCAACAGG CGCTGGCGCA GCAACAGAAC GTCGTGGCGG TAGGTGAGAT CGGGCTCGAT
CTTTATCGCG ACGACCCGCA GTTCGCCAGG CAAGAGCGAT TTTTAGACGC GCAACTGCAA
CTGGCAAAAC GCTACGATCT GCCGGTGATC CTGCACTCGC GGCGCACGCA TGACAAACTG
GCGATGCGCT TAAAGCGCCA GGAACTGCCG CGAACCGGTG TGGTGCATGG TTTTGCCGGC
AGCCTGCAGC AGGCCGAACG CTTTGTGCGA CTGGGCTATA AAATCGGCGT CGGCGGCACC
ATCACCTACC CGCGCGCCAG TAAAACCCGT GATGTTATGG CGCGGTTGCC GCTGGACGCG
CTGTTGCTGG AGACCGATGC GCCGGATATG CCGCTAAAGG GGTTTCAGGG GCAGCCGAAC
CGCCCGGAGC AGGCGGCGCG CGTATTTGAT GCGCTCTGCG AATTACGTCC GGAGCCCGCA
GAGGTGATAG CCGATACGCT GTATCGCAAT ACCATTACCT TGTTTCGGCT CTGA
 
Protein sequence
MSWRFIDTHC HFDFPPFTGD ERASIQRACE AGVEKIIVPA TEAAHFPRVL ALAARFPSLY 
AALGLHPIVI ERHADDDPDK LQQALAQQQN VVAVGEIGLD LYRDDPQFAR QERFLDAQLQ
LAKRYDLPVI LHSRRTHDKL AMRLKRQELP RTGVVHGFAG SLQQAERFVR LGYKIGVGGT
ITYPRASKTR DVMARLPLDA LLLETDAPDM PLKGFQGQPN RPEQAARVFD ALCELRPEPA
EVIADTLYRN TITLFRL