Gene SeHA_C4959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4959 
Symbol 
ID6491595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4840392 
End bp4841456 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content50% 
IMG OID642745002 
Productdiguanylate cyclase 
Protein accessionYP_002048574 
Protein GI194447645 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.179086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC CATCCTGGCG GTCGCTTCGT ATTAAGAAGT ATCAGTTTTC TTTACGTCTT 
TTCTTGTTTC TCAACGCCGT GTCGGCGCTA TTTACTCTCG TTTTCCCCCT TTATCAGATC
AATGTATTTT GCACGCCAAT GATCTGGATA GTGGTCCTGA GCGTATTACT GTTGATATGG
CATGGGAAAT ATGGACAAAA AAGAATTAAT CTCCCCTTTA TCTCCCTACT CTTTGGGGGA
ATATGGGCGG CGCATATTGC GCTAAAGTAT CCGGCGTTAG GCCATTATGA TTTCTCTTTT
TTACTGATCT CCCTGCTTAG CGTTCTGTTT ATCGGCTCGA TAGCCTTTGC CGCGAATATC
GTCGCGTTTA CGCTCTATTC GCTACCGCCA GTCGCGGTCT GCCTGTGGCT GAACGGTAAT
GAACAAGGTT TGCGAATTCT CTATTTGCTG GCCCTGCCAA TGGTGGGAAT CGCTATTCAA
CATGTTATCC AGAAAAGCTA CGATAATTTT GCCCAACAGC TCATGTTTAA GCTGCTGGCC
GAGCGGGAAA CCCTCAATGG CCTGAGCATG CTTGATCCAT TAACCGGCTT ATATAACCGC
CGTGGCCTGC AAAATCGGCT GGATACGTTA CAGGCGCCGG GCAGCCATGA ACACTACGTC
CTGCTATTGG ATATCGATCA TTTCAAAGCG TATAACGATC ACTACGGTCA TATGATGGGC
GATCAGGCGT TAATCCGCGT CTCAGCGGCA ATTCGGGACG CCGTGCGATC GCGCGATGTC
GTCTGCCGTT TTGGCGGGGA AGAATTTCTG GTGTTGCTGA CCACCGCCGA ACCACAGCAA
GCCCGCGCTA CCGCAGAACG TATCCGACAG GAAGTATACG ATCTTAAAAT CCCGCATATG
TTTAACGAAA GCGTCGCCAC CAATGTCACT GTCAGTATCG GCATTGCGCC CCTGACGGAT
CGCAATATCG GAGACGCTAT CGAAAAAGCG GATAAAGCGC TCTACGAAGC CAAGCATCTT
GGACGTAACC ACATTCTGGT CAGCGACGAC ATGCGCGCCC TATGA
 
Protein sequence
MTTPSWRSLR IKKYQFSLRL FLFLNAVSAL FTLVFPLYQI NVFCTPMIWI VVLSVLLLIW 
HGKYGQKRIN LPFISLLFGG IWAAHIALKY PALGHYDFSF LLISLLSVLF IGSIAFAANI
VAFTLYSLPP VAVCLWLNGN EQGLRILYLL ALPMVGIAIQ HVIQKSYDNF AQQLMFKLLA
ERETLNGLSM LDPLTGLYNR RGLQNRLDTL QAPGSHEHYV LLLDIDHFKA YNDHYGHMMG
DQALIRVSAA IRDAVRSRDV VCRFGGEEFL VLLTTAEPQQ ARATAERIRQ EVYDLKIPHM
FNESVATNVT VSIGIAPLTD RNIGDAIEKA DKALYEAKHL GRNHILVSDD MRAL