Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4959 |
Symbol | |
ID | 6491595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4840392 |
End bp | 4841456 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642745002 |
Product | diguanylate cyclase |
Protein accession | YP_002048574 |
Protein GI | 194447645 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.179086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC CATCCTGGCG GTCGCTTCGT ATTAAGAAGT ATCAGTTTTC TTTACGTCTT TTCTTGTTTC TCAACGCCGT GTCGGCGCTA TTTACTCTCG TTTTCCCCCT TTATCAGATC AATGTATTTT GCACGCCAAT GATCTGGATA GTGGTCCTGA GCGTATTACT GTTGATATGG CATGGGAAAT ATGGACAAAA AAGAATTAAT CTCCCCTTTA TCTCCCTACT CTTTGGGGGA ATATGGGCGG CGCATATTGC GCTAAAGTAT CCGGCGTTAG GCCATTATGA TTTCTCTTTT TTACTGATCT CCCTGCTTAG CGTTCTGTTT ATCGGCTCGA TAGCCTTTGC CGCGAATATC GTCGCGTTTA CGCTCTATTC GCTACCGCCA GTCGCGGTCT GCCTGTGGCT GAACGGTAAT GAACAAGGTT TGCGAATTCT CTATTTGCTG GCCCTGCCAA TGGTGGGAAT CGCTATTCAA CATGTTATCC AGAAAAGCTA CGATAATTTT GCCCAACAGC TCATGTTTAA GCTGCTGGCC GAGCGGGAAA CCCTCAATGG CCTGAGCATG CTTGATCCAT TAACCGGCTT ATATAACCGC CGTGGCCTGC AAAATCGGCT GGATACGTTA CAGGCGCCGG GCAGCCATGA ACACTACGTC CTGCTATTGG ATATCGATCA TTTCAAAGCG TATAACGATC ACTACGGTCA TATGATGGGC GATCAGGCGT TAATCCGCGT CTCAGCGGCA ATTCGGGACG CCGTGCGATC GCGCGATGTC GTCTGCCGTT TTGGCGGGGA AGAATTTCTG GTGTTGCTGA CCACCGCCGA ACCACAGCAA GCCCGCGCTA CCGCAGAACG TATCCGACAG GAAGTATACG ATCTTAAAAT CCCGCATATG TTTAACGAAA GCGTCGCCAC CAATGTCACT GTCAGTATCG GCATTGCGCC CCTGACGGAT CGCAATATCG GAGACGCTAT CGAAAAAGCG GATAAAGCGC TCTACGAAGC CAAGCATCTT GGACGTAACC ACATTCTGGT CAGCGACGAC ATGCGCGCCC TATGA
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Protein sequence | MTTPSWRSLR IKKYQFSLRL FLFLNAVSAL FTLVFPLYQI NVFCTPMIWI VVLSVLLLIW HGKYGQKRIN LPFISLLFGG IWAAHIALKY PALGHYDFSF LLISLLSVLF IGSIAFAANI VAFTLYSLPP VAVCLWLNGN EQGLRILYLL ALPMVGIAIQ HVIQKSYDNF AQQLMFKLLA ERETLNGLSM LDPLTGLYNR RGLQNRLDTL QAPGSHEHYV LLLDIDHFKA YNDHYGHMMG DQALIRVSAA IRDAVRSRDV VCRFGGEEFL VLLTTAEPQQ ARATAERIRQ EVYDLKIPHM FNESVATNVT VSIGIAPLTD RNIGDAIEKA DKALYEAKHL GRNHILVSDD MRAL
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