Gene SeHA_C4956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4956 
Symbol 
ID6492144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4838149 
End bp4838823 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content49% 
IMG OID642744999 
ProductDNA-binding transcriptional activator BglJ 
Protein accessionYP_002048571 
Protein GI194449326 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA GAATCAGCAA GAGAAATGTT GCGCTCGTAG AAAAATGCGT GATGAGCACC 
ATTGGTATTA AAGGGCTATT TGATGCAATG CCGGATTGCC GACATACGCT TCATATTTTT
TCAAAACCAT CCGCGTTTTA TAAGGCTGCG CTAACGACGC CGTTTTCTGC CGTTATTTTT
TCTCTTTCTG CGTTAAGAAC TGAACGCCGG ACAGGATTAT CCAGCCTGAC GGAACTGGCG
ATAAATTATC CCCATATGCG GCGTCTGGTG ATTGCCGATG ATGATGCTGA AGCTCGCTTA
ATCAGCGCGC TATCCCCGCT GCCGCTGGAT GGGGTCATCA GCAAAGCGTC GCCGTTGGAT
GTTTTACAGG ATGCCTTATT TACATCGCTT AATAGCGCCC GACGGACAAC GGAGCGTACA
GACAATCTTT GGGAGCTTCA CCAGAATTGT ATGCTTAGTC CAACCGAGCG GGAGATTCTG
CGTTTTATGT CGAACGGCTA CTCAATGCCG CAAATTGCTG TCCAGTTAGA ACGTAACATT
AAGACTATCC GAGCGCATAA GTTTAATGTG ATGTCCAAGC TGGGCGTGAG TTCTGATGCC
GGGTTACTCG ATGCGGCGGA TATTCTGTTA TATCTGCGCG CCGGCGATGC TACCGCGCTC
CAGCATCGGG TATAG
 
Protein sequence
MENRISKRNV ALVEKCVMST IGIKGLFDAM PDCRHTLHIF SKPSAFYKAA LTTPFSAVIF 
SLSALRTERR TGLSSLTELA INYPHMRRLV IADDDAEARL ISALSPLPLD GVISKASPLD
VLQDALFTSL NSARRTTERT DNLWELHQNC MLSPTEREIL RFMSNGYSMP QIAVQLERNI
KTIRAHKFNV MSKLGVSSDA GLLDAADILL YLRAGDATAL QHRV