Gene SeHA_C4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4955 
Symbol 
ID6491784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4837463 
End bp4838188 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content44% 
IMG OID642744998 
ProductLuxR family transcriptional regulator 
Protein accessionYP_002048570 
Protein GI194448656 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAG GATGCTGCAA AAATGGACTT ATTATCAGTA AAACCCCTCT TATACAGGAA 
GGCCTTAAAG GGGCTATAAC AGGTAATTTC CCCGATTATA AACTGGCGTA TTGTCGTACG
ATAGAAGAGC TAACGCTGCT ACAGCTACGC CGAAGTAATT TAGTTATTGC TGATTTAGCA
GTTAACAATG CCTCTCCCCG CGCTATCTGC GAATATTTTT ATAGCTTACT CTCGCAATAT
CGCGACATAC ATTGGGTATT TCTGGTTCCT AAATCCTGCT ATCCACATGC GGTTGATCTC
CTGATGGGCC CCGTCAGCAC CTTGCTTTCA GACGAAGAGC CAATCGAGAA TCTTATTAGC
GTTATCCATG CGGGAAACGC TCGCTCAGAA AGAATAAGCA AAACATTATT ATCGCCTCAG
GTACCGTCTG AAATTCAGCA GTCCCACGAC AGGCCGATTG TCCTTACGCT GTCTGAACGA
AAAGTATTAC GCCTTTTAGG AAAAGGGTGG GGCATTAACC AAATTGCGGC GTTACTTAAA
AAAAGTAATA AAACAATTAG CGCCCAAAAA AATAGCGCCA TGCGACGCTT ATCAATACAC
AGTAATGCAG AGATGTATGC ATGGATAAAC AGTTCTCAGG GAGCCAGAGA ATTGAACCTA
CCTTCGGTAT ATGGAGAAAC CATGGAATGG AAAACAGAAT CAGCAAGAGA AATGTTGCGC
TCGTAG
 
Protein sequence
MLPGCCKNGL IISKTPLIQE GLKGAITGNF PDYKLAYCRT IEELTLLQLR RSNLVIADLA 
VNNASPRAIC EYFYSLLSQY RDIHWVFLVP KSCYPHAVDL LMGPVSTLLS DEEPIENLIS
VIHAGNARSE RISKTLLSPQ VPSEIQQSHD RPIVLTLSER KVLRLLGKGW GINQIAALLK
KSNKTISAQK NSAMRRLSIH SNAEMYAWIN SSQGARELNL PSVYGETMEW KTESAREMLR
S