Gene SeHA_C4911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4911 
Symbol 
ID6490616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4792401 
End bp4793174 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content55% 
IMG OID642744956 
ProductDNA-binding transcriptional repressor UxuR 
Protein accessionYP_002048528 
Protein GI194450357 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.460485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA ACACTTCTCA GCAAAGACCT TACCAGGAAG TGGGCGCAAT GATACGGGAT 
CTGATTGTGC AGACGCCGTA CCGCCCCGGG GAGCGCTTGC CGCCGGAAAG AGAGATCGCT 
GAGAGGCTCA ATGTGACGCG TACCGTCGTG CGTGAAGCGC TGATCATGCT GGAAATTAAA 
GGTCTGGTTG AAGTCCGCCG CGGCGCCGGG ATCTACGTGC TCGACAGTGC GGATAATAAC 
GAGATGGAAG GCGCTGACGT CAATCACTGT AATGACGCCG GGCCGTTTGA ACTGTTACAG 
GCGCGTCAGT TGCTGGAAAG CAATATCGCT GAATTTGCCG CTCTGCAGGC CACCCGCGAA 
GACATCATTA AAATGCGCCA GGCGTTACAA CTGGAAGAGC GAGAGCTCGC CTCCAGCGCG 
CCGGGCGGCT CAGAAAGCGG CGATATGCAG TTTCATCTGG CCATTGCCGA AGCGACCCAT 
AACAGTATGT TGGTAGAGCT CTTCCGTCAG TCCTGGCAAT GGCGTGAAAA TAATCCGATG 
TGGCTCCAGC TTCATAGCCA TCTGGGCGAT ACGCTTTACC GTAAGGAGTG GCTGGTCGAT 
CATAAGCAGA TCCTCGCGGC GTTAATTAAG AAAGACGCCC GCGCAGCGAA GCTGGCGATG 
TGGCAGCACC TGGAAAACGT GAAGCAGCGT CTGCTGGAGT TTTCCAATGT TGATGACATC 
TACTTTGATG GCTATCTGTT TGAGTCATGG CCGCTGGACA ACGTTGATGC CTGA
 
Protein sequence
MKSNTSQQRP YQEVGAMIRD LIVQTPYRPG ERLPPEREIA ERLNVTRTVV REALIMLEIK 
GLVEVRRGAG IYVLDSADNN EMEGADVNHC NDAGPFELLQ ARQLLESNIA EFAALQATRE 
DIIKMRQALQ LEERELASSA PGGSESGDMQ FHLAIAEATH NSMLVELFRQ SWQWRENNPM 
WLQLHSHLGD TLYRKEWLVD HKQILAALIK KDARAAKLAM WQHLENVKQR LLEFSNVDDI 
YFDGYLFESW PLDNVDA