Gene SeHA_C4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4887 
Symbol 
ID6488090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4758906 
End bp4759670 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID642744933 
Productgluconate 5-dehydrogenase 
Protein accessionYP_002048506 
Protein GI194447613 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.851377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC TTTTTTCACT GGCAGGTAAA AATATCCTTA TCACCGGAGC CGCTCAGGGA 
ATTGGTTATT TGCTGGCGAC CGGTCTTGGT CGCTATGGCG CGCGCATTAT TGTTAACGAT
ATCACCCCGG AGCGCGCCGA AACAGCCGTG ACGAAACTTC AGCAGGAAGG GATAAAGGCT
ATTGCCGCTC CCTTTAATGT CACCAATAAA CAGGATATTG AAGCTGCGGT TGAACATATC
GAAAAAGATA TCGGCGTCAT TGACGTCCTG ATAAATAACG CCGGTATCCA GCGCCGTCAT
CCGTTTACTG AGTTTCCCGA GCAGGAGTGG AATGACGTCA TCGCCGTAAA TCAAACCGCG
GTTTTTCTCG TCTCTCAGGC CGTTACGCGC CGTATGGTGG CGCGTCAGGC AGGAAAAGTG
ATCAACATCT GTTCGATGCA AAGCGAGCTG GGCCGCGACA CGATTACGCC ATACGCCGCG
TCGAAGGGTG CCGTGAAGAT GCTGACTCGC GGCATGTGCG TGGAGCTGGC GCGTCATAAT
ATCCAGGTCA ACGGTATTGC GCCGGGATAC TTCAAAACGG AGATGACCAA AGCGCTGGTT
GAAGATGAAG CCTTCACCTC CTGGCTATGC AAACGTACGC CTGCCGCACG CTGGGGCCAT
CCCCAGGAGC TTATTGGCGC AGCGGTGTTT CTCTCGTCAA AAGCCTCCGA CTTTGTTAAC
GGACATCTGC TGTTTGTCGA TGGCGGTATG CTGGTTGCCG TCTGA
 
Protein sequence
MNDLFSLAGK NILITGAAQG IGYLLATGLG RYGARIIVND ITPERAETAV TKLQQEGIKA 
IAAPFNVTNK QDIEAAVEHI EKDIGVIDVL INNAGIQRRH PFTEFPEQEW NDVIAVNQTA
VFLVSQAVTR RMVARQAGKV INICSMQSEL GRDTITPYAA SKGAVKMLTR GMCVELARHN
IQVNGIAPGY FKTEMTKALV EDEAFTSWLC KRTPAARWGH PQELIGAAVF LSSKASDFVN
GHLLFVDGGM LVAV