Gene SeHA_C4776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4776 
Symbol 
ID6488916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4654301 
End bp4655623 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content57% 
IMG OID642744828 
ProductN-acetylmuramoyl-l-alanine amidase II 
Protein accessionYP_002048401 
Protein GI194449841 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0470282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTATC GCATCAAAAA TGCCGTAATA GCAGCCTTAA TCCTGCTGTG CGCGCAGGCG 
GGCGCCGCCA GTCTCTCTGA TATTCAGGTG TCCAACGGCG AGCAGCAGGC GCGCATTACG
CTGAGTTTTA TCGGCGAGCC GGAATATGCT TACTCACAGG ACGGTAAACG TACCGTGGCG
CTGGATATCA GGCAGACCGG CGTGATTCAG GGGCTGCCGC TTCAGTTTAG CGGTAACAAT
CTGGTGAAAA CGATCCGTGC CGGAACGCCG AAAGATGCGC AATCTTTACG GTTGCTTGTC
GATCTGACGG AAAATGGTAA AACCGAGGCT GTGAAGCGGC AAAACGGCGG CAACTATACG
GTCATTTTCA CCATTAATGC CGATGTTCCG CCGCCACCAC CACCGCCTGT CGTCGCGAAA
CGGGTTGAAA GCGCGCCCCG CCCGACGGAG CCTGCCCGTA ATCCGTTTAA ATCTTCTGAT
GATCGCCTGA CCGGCGTAAC CAGCAGCAAT ACCGTTACGC GGCCTGCGGC GCGCGCGTCA
GCAGGCGCTG GCGATAAAGT GGTGATTGCT ATTGATGCCG GGCATGGAGG TCAGGACCCC
GGCGCAATAG GTCCGGGCGG TACGCGCGAG AAAAATGTCA CCATCGCCAT CGCGCGTAAG
TTACGCACAT TACTGAATAA CGATCCGATG TTTAAAGGCG TGCTGACGCG TGACGGCGAC
TATTTTATTT CGGTGATGGG GCGGTCTGAC GTGGCGCGTA AGCAAAACGC CAACTTCCTT
GTCTCTATTC ATGCGGATGC CGCGCCAAAT CGCGACGCCA CCGGCGCCTC CGTCTGGGTA
TTGTCCAATC GTCGCGCGAA CAGCGAAATG GCAAACTGGC TTGAGCAGCA TGAGAAGCAA
TCCGAACTGT TAGGCGGCGC TGGCGATGTG CTGGCGAACA GTCAGTCAGA CCCTTACCTG
AGCCAGGCGG TACTGGATTT GCAATTCGGT CATTCGCAGC GGGTAGGGTA TGATGTGGCG
ACGAACGTGC TAAGCCAACT GGATGGTGTG GGGTCGTTGC ATAAACGTCG CCCGGAACAC
GCGAGCCTGG GCGTGTTGCG TTCGCCGGAT ATCCCGTCCA TTTTGGTGGA GACGGGCTTT
ATCAGTAATC ACGGCGAAGA GCGATTGCTG GCGAGCGACC GCTATCAGCA GCAGATTGCT
GACGCTATAT ACCGGGGGTT GCGTAAGTAC TTTGCAGCGC ATCCGATCCA GTCTGCGCCG
CAGGGCGGCC CAGGCCAGAC GGCCAGTACC AACCAGCCTG GCGCCATAAC CGCCGCGAAT
TAA
 
Protein sequence
MIYRIKNAVI AALILLCAQA GAASLSDIQV SNGEQQARIT LSFIGEPEYA YSQDGKRTVA 
LDIRQTGVIQ GLPLQFSGNN LVKTIRAGTP KDAQSLRLLV DLTENGKTEA VKRQNGGNYT
VIFTINADVP PPPPPPVVAK RVESAPRPTE PARNPFKSSD DRLTGVTSSN TVTRPAARAS
AGAGDKVVIA IDAGHGGQDP GAIGPGGTRE KNVTIAIARK LRTLLNNDPM FKGVLTRDGD
YFISVMGRSD VARKQNANFL VSIHADAAPN RDATGASVWV LSNRRANSEM ANWLEQHEKQ
SELLGGAGDV LANSQSDPYL SQAVLDLQFG HSQRVGYDVA TNVLSQLDGV GSLHKRRPEH
ASLGVLRSPD IPSILVETGF ISNHGEERLL ASDRYQQQIA DAIYRGLRKY FAAHPIQSAP
QGGPGQTAST NQPGAITAAN