Gene SeHA_C4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4766 
Symbolpsd 
ID6488837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4646515 
End bp4647483 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID642744818 
Productphosphatidylserine decarboxylase 
Protein accessionYP_002048394 
Protein GI194450661 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00163] phosphatidylserine decarboxylase precursor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.348054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.116072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAAACT CATTTAAACT TTCGCTACAA TACATTCTGC CGAAACTATG GCTCACTCGC 
CTGGCGGGCT GGGGCGCAAG CAAACGAGCA GGATGGCTGA CAAAACTGGT TATCGATCTC
TTCGTAAAGT ATTACAAAGT CGATATGACC GAGGCGCAAA AACCCGATAC CGCCAGCTAT
CGTACGTTCA ATGATTTCTT TGTTCGTCCG CTGCGTGATG ACGTGCGTCC GCTCAATACC
GATCCTAACA TCCTGGTGAT GCCTGCTGAC GGCGTGATAA GCCAGTTGGG TCGTATCGAA
GAAGATAAAA TTTTGCAGGC CAAAGGCCAT AATTACAGCC TTGAAGCGTT GCTGGCGGGT
AACTACCTGA TGGCGGATAA GTTCCGCAAC GGCACGTTTG TGACCACTTA CCTCTCCCCT
CGCGACTACC ATCGCGTGCA TATGCCATGC AACGGCATCC TGCGTGAAAT GATCTACGTA
CCGGGCGATC TGTTCTCCGT TAACCATCTG ACCGCGCAAA ACGTCCCCAA CCTGTTTGCC
CGCAACGAGC GCGTTATCTG TCTGTTTGAT ACCGAGTTCG GCCCTATGGC GCAGATTCTG
GTCGGCGCAA CAATTGTCGG CAGTATCGAA ACCGTCTGGG CGGGGACCAT TACCCCGCCG
CGCGAAGGCA TCATCAAGCG CTGGACCTGG CCAGAAGGCG AACATGAAGG GTCTGTCGCC
TTGTTGAAAG GCCAGGAGAT GGGGCGCTTT AAACTGGGTT CCACGGTCAT CAACTTATTT
GCGCCGGGGA AAGTGAATCT GATCGCGTCG CTGGCAAGCC TGTCCGTTAC CAAAATTGGC
CAACCGCTGG CTACGTCGAC CGAAACATTC GTCGCGCCGG AGGTGGAACC TGCTCCGCTG
CCGGCAGAAG AAATTAAAGC TGAACACGAC GCCAGCCCGC TGGTTGACAA TAAAAAAGAC
GACACCTAA
 
Protein sequence
MLNSFKLSLQ YILPKLWLTR LAGWGASKRA GWLTKLVIDL FVKYYKVDMT EAQKPDTASY 
RTFNDFFVRP LRDDVRPLNT DPNILVMPAD GVISQLGRIE EDKILQAKGH NYSLEALLAG
NYLMADKFRN GTFVTTYLSP RDYHRVHMPC NGILREMIYV PGDLFSVNHL TAQNVPNLFA
RNERVICLFD TEFGPMAQIL VGATIVGSIE TVWAGTITPP REGIIKRWTW PEGEHEGSVA
LLKGQEMGRF KLGSTVINLF APGKVNLIAS LASLSVTKIG QPLATSTETF VAPEVEPAPL
PAEEIKAEHD ASPLVDNKKD DT