| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4765 |
|---|
| Symbol | |
|---|
| ID | 6489377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 4643170 |
|---|
| End bp | 4646496 |
|---|
| Gene Length | 3327 bp |
|---|
| Protein Length | 1108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642744817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002048393 |
|---|
| Protein GI | 194450171 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.514219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.17769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTGA TTATTGCTTT TCTGATGGCC TGGTGCCTCA GCACGGGGGC GTTCGCCGCA
ACGGCCCCCG ACGCCAAACA AATCACGCAG GAACTGGAGC AGGCAAAAGC GGCGAAGCCC
GCTCAGCCGG AAGCCGTTGA GGCGCTCCAG ACTGCGTTAA ACGCGCTTGA AGAGCGAAAA
GGCTCGCTTG AGCGCGCGAA ACAATATCAA CACGTTATTG ATAATTTCCC TAAGCTATCC
GCCACCTTGC GCGCCCAGTT GAATAATCTG CGCGATGAAC CTCGCAGCGT ACCGCCAGAG
ATGTCCACCG AAGCGTTAAA TCAGGAGATC TTGCAGGTTA GCAGCCAGCT ACTGGATAAA
ACCCGCGAGG CGCAACAGGA GCAGGAGCGC GTCAGGGAGA TCGCCGACTC GCTCAGCCAG
CTTCCCCAAC AGCAAAACGA CGCCCGCCGC CAGCTTAATG AGATTGAGCG ACGGCTCGGC
GCCGCAGGCG GAAGTGCCGC GCTTAGCCAG GCGCAAAGTC TCAGTATGCA GGCGGAGTCC
GCCAAACTAA AAGCGTTAGT CGACGAACTG GAGTTGGCGC AACTGTCCGC CAACAACCGG
CAGGAACTGG CTCGTCTGCG TTCCGAGCTG GCGGAAAAAC AGAGTCAGCA ATTGGATGCG
TATCTTCAGG CGCTGCGCAA TCAGCTCAAC AGCCTGCGCC AACGTGAAGC GGAACGCGCG
CTGGAAAGTA CTGAGCTGCT GGCGGAAAAC AGCGCCGGTT TGCCGGAAGG CATCGTCGAA
CAATTTAAAG TCAACCGCGA GCTGTCACAG GCGCTCAATC AACAAGCGCA GCGGATGGAT
CTGGTCGCCT CGCAGCAGCG ACAGGCCACC AGCCAAACGT TACAGGTGCG CCAGGCGCTC
AATACGCTGC GGGAGCAGTC GCAATGGCTT GGCGTGTCCA ACATGCTTGG CGAAGCGCTG
CGCGCGCAGG TCGCCCGTCT GCCAGAGATG CCTAAACCGC AGCAGCTTGA TACGGAAATG
GCGCAGCTAC GCGTTCACCG TATGCGCTAT GAAGAATTAC TCAATAAACA GCCGCAGCTA
CGGCAAATAC GTCAGGCCAA TGGACAACCA CTGACCGCCG AGCAAAACCA GATTCTTGAC
GCCCAGCTTC GCACTCAGCG CGAGCTGCTC AACTCTTTGT TACAGGGCGG CGACACGCTG
ATCCTGGAGT TAACCAAACT GAAAGTCTCC AACAGCCAAC TGGAGGATGC GCTTAAAGAG
GTTAATGAAG CGACCCACCG TTATCTGTTC TGGACCGCTG ACGTTAGCCC GCTATCGCTC
TCCTGGCCTG TTGATTTGGT TCAGGATTTA CGTCGGCTTA TCTCATTAGA TACGTTTAAT
CAGTTAGGTA AAGCCAGCAT CATGATGCTG ACCAGCAAAG AGACGCTACT GCCGTTATTC
GGCGCGCTGG CGCTGGTCGG GTTTAGCCTC TATTCACGCC AACACTTCAA CCGGTTCCTT
GAGCGCTCGG CCTCGCGCGT CGGGAAAGTC ACCCAGGATC ACTTCTCGCT GACGCTGCGA
ACGGTGTTCT GGTCGATTCT GGTCGCCTCG CCGCTGCCCG TCTTGTGGGC GACGCTCGGC
TATGGTCTAC AGGAAGCCTG GCCGTATCCG CTGGCCGTCG CCATCGGCGA TGGCGTGACG
GCGACAGTAC CGCTGTTGTG GGTAGTCATG ATTTGCGCCG CGTTTGCCCG CCCTAATGGT
CTGTTTGTGG CGCATTTCGG CTGGCCGCGA AACCGGGTAG CGAAAGCAAT GCGCTACTAC
CTGATGAGCA TTGGGCTGAT CGTGCCGCTC ATTATGGCAG TGATCATGTT TGATAATCTT
AACGATCGGG AGTTTTCCGG CTCGTTGGGC CGCCTTTGCT TCATCCTGAT ATGCGGCGCG
CTGGCGCTGG TCACGCTGAG TCTGAAAAAA GCGGGCATCC CGCTCTATCT TGATAAAGAA
GGCAACGGCG ACAACATGGT CAACAGCCTG TTGTGGAATA TGTTGATGGG CGCGCCGCTT
ATCGCGATTC TGGCGGCGGC GGTGGGTTAT CTGGCCACGG CGCAGGCGCT ACTGGCGAGA
CTGGAAACCT CGGTCGCCAT CTGGTTCCTG TTGCTGGTCA TCTATCACGT CATTCGCCGC
TGGATGCTGA TCCAACGACG CCGACTGGCT TTTGACCGCG CCAAACATCG TCGGGCGGAA
ATGCTGGCGC AGCGCGCGCG CGGCGAAGAA GAACCGGCGC ACTCCTCCAG CCTGGAAGGC
GCGGTCGACA TCGATGAAAG TGAAATCGAT CTTGACGCTA TTAGCGCTCA GTCGCTGCGT
CTGGTCCGCT CAATTCTGAT GCTTATCGCC CTGCTATCGG TAATTGTACT GTGGTCGGAA
ATCCACTCGG CATTCGGCTT CCTGGAGAAT ATTTCGCTGT GGGATGTCAC CTCTACGGTG
CAAGGCGTGG AAAGCCTGGA GCCGATTACC CTCGGGGCGG TGCTCATTGC GATTCTGGTC
TTTATCATCA CCACGCAGTT GGTGCGTAAT CTGCCTGCTC TGCTGGAACT GGCGTTATTA
CAGCATCTCG ATTTAACGCC TGGTACCGGT TACGCCATCA CGACCATCAC CAAATATCTG
TTAATGCTGA TTGGCGGGCT GGTCGGTTTC TCGATGATCG GCATTGAGTG GTCGAAGCTA
CAATGGCTGG TGGCCGCGCT CGGCGTTGGG CTTGGTTTTG GCCTGCAAGA AATTTTCGCT
AACTTTATCT CCGGCCTGAT TATTTTGTTT GAAAAGCCGA TTCGTATCGG CGATACGGTG
ACCATTCGCG ATCTCACCGG CAGCGTGACC AAAATCAATA CCCGCGCCAC CACCATCAGT
GACTGGGATC GTAAAGAGAT TATCGTGCCG AATAAAGCCT TTATCACCGA ACAGTTTATC
AACTGGTCGC TGTCTGACTC CGTTACGCGC GTGGTGTTAA CCATCCCGGC GCCAGCGGAT
GCCAATAGCG AAGAGGTGAC GCAAATTCTG CTGACGGCGG CGCAGCGCTG TTCTTTGGTG
CTGGACAACC CGCCGCCTGA AATCTTTCTG GTGGATCTCC AGCAGGGTAT TCAAATTTTC
GAACTGCGTA TCTATGCCGC GGAAATGGGA CACCGTATGC CATTACGCCA TGAGATCCAC
CAATTGATTC TGGCGGGCTT CCGCGAGCAC GGTATTGATA TGCCGTTCCC GCCGTTCCAA
ATGCGTCTGG AGAGCCTCGG CGGTAAACAA ACGGGGAGAA CGTTAACGTC AGCGGGTAAA
ACCAGCCGCC CGGCGGGGAG TTTGTAG
|
|---|
| Protein sequence | MRLIIAFLMA WCLSTGAFAA TAPDAKQITQ ELEQAKAAKP AQPEAVEALQ TALNALEERK
GSLERAKQYQ HVIDNFPKLS ATLRAQLNNL RDEPRSVPPE MSTEALNQEI LQVSSQLLDK
TREAQQEQER VREIADSLSQ LPQQQNDARR QLNEIERRLG AAGGSAALSQ AQSLSMQAES
AKLKALVDEL ELAQLSANNR QELARLRSEL AEKQSQQLDA YLQALRNQLN SLRQREAERA
LESTELLAEN SAGLPEGIVE QFKVNRELSQ ALNQQAQRMD LVASQQRQAT SQTLQVRQAL
NTLREQSQWL GVSNMLGEAL RAQVARLPEM PKPQQLDTEM AQLRVHRMRY EELLNKQPQL
RQIRQANGQP LTAEQNQILD AQLRTQRELL NSLLQGGDTL ILELTKLKVS NSQLEDALKE
VNEATHRYLF WTADVSPLSL SWPVDLVQDL RRLISLDTFN QLGKASIMML TSKETLLPLF
GALALVGFSL YSRQHFNRFL ERSASRVGKV TQDHFSLTLR TVFWSILVAS PLPVLWATLG
YGLQEAWPYP LAVAIGDGVT ATVPLLWVVM ICAAFARPNG LFVAHFGWPR NRVAKAMRYY
LMSIGLIVPL IMAVIMFDNL NDREFSGSLG RLCFILICGA LALVTLSLKK AGIPLYLDKE
GNGDNMVNSL LWNMLMGAPL IAILAAAVGY LATAQALLAR LETSVAIWFL LLVIYHVIRR
WMLIQRRRLA FDRAKHRRAE MLAQRARGEE EPAHSSSLEG AVDIDESEID LDAISAQSLR
LVRSILMLIA LLSVIVLWSE IHSAFGFLEN ISLWDVTSTV QGVESLEPIT LGAVLIAILV
FIITTQLVRN LPALLELALL QHLDLTPGTG YAITTITKYL LMLIGGLVGF SMIGIEWSKL
QWLVAALGVG LGFGLQEIFA NFISGLIILF EKPIRIGDTV TIRDLTGSVT KINTRATTIS
DWDRKEIIVP NKAFITEQFI NWSLSDSVTR VVLTIPAPAD ANSEEVTQIL LTAAQRCSLV
LDNPPPEIFL VDLQQGIQIF ELRIYAAEMG HRMPLRHEIH QLILAGFREH GIDMPFPPFQ
MRLESLGGKQ TGRTLTSAGK TSRPAGSL
|
|---|
| |