Gene SeHA_C4729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4729 
Symbol 
ID6488839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4611453 
End bp4612349 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content40% 
IMG OID642744783 
Productregulatory protein DeoR 
Protein accessionYP_002048360 
Protein GI194450504 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.172096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACT CAACGAGAAA TCGCTCAGCG GAGCGTTTGA TTGATATCCT TGTTGAATTA 
CAAAATTATG GCGTGGTCAG TCGCTATAAT TTGATGAAAA AATACAACAT CACTGAGCGA 
ACAGCATATC GTGATCTGAA TATGCTTTCT CCCTTTATTG AAGCCTGTGG CGATGGAAAA 
TACCGGCTTA TTTCGGCAAG AGCAGGAAAC CAGAGCAAAG AATCACTGCA CAAATCTCTG 
GCCAGGTTAC TGGATACTGA TGCGATTTTT CCTGAACGGG ATGAAGGTTT CTGGCAGAAA 
TTAGAAAACA GGGCAACCGA AAGGCATATT CGTGTTCAGT TTCATAACCC TGAGCACACC 
ATCAGGGATG ATTTAAGAAA ATATCTTGAT GTTCTTGAAA AAGCGATCTG CAACAGTAAT 
GTTTGCCAGA TTGCATATGC CGGTAAGACC AGAATCGTTC ATCCCTATAA ATTAACTAAT 
CAGAGAGGTA TATGGTATTT GCTGGCTACT GAAGAGAACA AGTTAAAGTC GTTTTCATTA 
GCTAAAATAA AATGGCTGGA TATAAAAAAA GAAAAGTTTG CAAAGAGTGA TGAAATCCAG 
TCACTGGTAA GTGAGTCATG TGACCCGTGG GTGAGCGACA AAACATTTGA TGTTGTGTTG 
TTCATTTACA GTAATATCGC CCATTATTTT TTGCGACGGG ACTTACTTCC TTACCAGCAA 
TTGCTACACA AACATGACAA TGGCATTACG CTGTCATGCA AGGCTGCACA TAAAAATCAA 
ATTGTCCCGT TGATTTTATA CTGGCTACCG AATGTTGAAA TTATTGAACC AGTATGGCTG 
AAAGAAGCCG TGTTAACAAT GTTAGGAAAA TACCTTACTG CTGAGAATGT TTCCTGA
 
Protein sequence
MVDSTRNRSA ERLIDILVEL QNYGVVSRYN LMKKYNITER TAYRDLNMLS PFIEACGDGK 
YRLISARAGN QSKESLHKSL ARLLDTDAIF PERDEGFWQK LENRATERHI RVQFHNPEHT 
IRDDLRKYLD VLEKAICNSN VCQIAYAGKT RIVHPYKLTN QRGIWYLLAT EENKLKSFSL 
AKIKWLDIKK EKFAKSDEIQ SLVSESCDPW VSDKTFDVVL FIYSNIAHYF LRRDLLPYQQ 
LLHKHDNGIT LSCKAAHKNQ IVPLILYWLP NVEIIEPVWL KEAVLTMLGK YLTAENVS