Gene SeHA_C4728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4728 
Symbol 
ID6489211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4610296 
End bp4611033 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content46% 
IMG OID642744782 
Productheat resistant agglutinin 1 
Protein accessionYP_002048359 
Protein GI194450577 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTATTGCTGT TTCAACACTT GCAATGGCAG GCATGTTTTC GGCCCAGACT 
CTGGCTGATG AGAACAAAAC TGGCTTTTAT GTGACCGGTA AAGCCGGTGT TTCTGTTATG
TCACTTTCAG AGCAACGTTT CGTTGATGGT GAAGGGGCAT GGGCGGATAA ATACAAAGGC
AGTGACAAAA GTGATACGGT TTTTGGCGCA GGCCTTGCGG TGGGATACGA TTTTTATCAG
CACTACAATG TGCCGGTGCG TACTGAAGTG GAGTTTTATG GCCGCGGTAA CGCTGAATCA
AAATATCGTC TGAGTTATTG GGAAAGTGCC GGTGGTGCCG AGTTCGATGA TGCACAGAAC
AAGCTCAGTG TAAACACGCT GATGCTGAAT GCGTATTATG ATTTCAGAAA CAGCAGTGCA
TTCACGCCAT GGATATCTGC TGGTCTGGGT TATGCACGGG TTCATCATAA AACTTCGTAC
ATATATACCG ATAACAGCCC GGCAGGCAGT GAAGTTTATT CAGCTTCAGC GTCAAAATAC
GAAAACAACC TGGCATGGAG CCTGGGTGCC GGTGTTAAAT ACGATGTGAC GCAGGATTTC
AGCCTTGACC TCAGCTACCG GTATCTGGAT GCAGGGGATT CCACTCTGAC TTATAAAGAT
GAGGATGGTG CTAAATATAA ATCCTCTGTT GATGTCAGAA GTAACGAGTT TATGTTAGGT
GCAACATATA ACTTCTGA
 
Protein sequence
MKKVIAVSTL AMAGMFSAQT LADENKTGFY VTGKAGVSVM SLSEQRFVDG EGAWADKYKG 
SDKSDTVFGA GLAVGYDFYQ HYNVPVRTEV EFYGRGNAES KYRLSYWESA GGAEFDDAQN
KLSVNTLMLN AYYDFRNSSA FTPWISAGLG YARVHHKTSY IYTDNSPAGS EVYSASASKY
ENNLAWSLGA GVKYDVTQDF SLDLSYRYLD AGDSTLTYKD EDGAKYKSSV DVRSNEFMLG
ATYNF