Gene SeHA_C4716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4716 
Symbol 
ID6487731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4600289 
End bp4601497 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content45% 
IMG OID642744773 
Producttransposase (IS4 family) 
Protein accessionYP_002048350 
Protein GI194449483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.189582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAAC TCGATATTTT ACACGACTCT CTTTACCAAT TCTGCCCCGA ATTACACTTA 
AAACGACTCA ACAGCTTAAC GTTGGCTTGC CACGCCTTAC TTGACTGTAA AACTCTCACT 
CTTACCGAAC TTGGCCGTAA CCTGCCAACC AAAGCGAGAA CAAAACATAA CATCAAACGA 
ATCGACCGAT TGTTAGGTAA TCGTCACCTC CACAAAGAGC GACTCGCTGT ATACCGTTGG 
CATGCTAGCT TTATCTGTTC GGGCAATACG ATGCCCATTG TACTTGTTGA CTGGTCTGAT 
ATCCGTGAGC AAAAACGGCT TATGGTATTG CGAGCTTCAG TCGCACTACA CGGTCGTTCT 
GTTACTCTTT ATGAGAAAGC GTTCCCGCTT TCAGAGCAAT GTTCAAAGAA AGCTCATGAC 
CAATTTCTAG CCGACCTTGC GAGCATTCTA CCGAGTAACA CCACACCGCT CATTGTCAGT 
GATGCTGGCT TTAAAGTGCC ATGGTATAAA TCCGTTGAGA AGCTGGGTTG GTACTGGTTA 
AGTCGAGTAA GAGGAAAAGT ACAATATGCA GACCTAGGAG CGGAAAACTG GAAACCTATC 
AGCAACTTAC ATGATATGTC ATCTAGTCAC TCAAAGACTT TAGGCTATAA GAGGCTGACT 
AAAAGCAATC CAATCTCATG CCAAATTCTA TTGTATAAAT CTCGCTCTAA AGGCCGAAAA 
AATCAGCGCT CGACACGGAC TCATTGTCAC CACCCGTCAC CTAAAATCTA CTCAGCGTCG 
GCAAAGGAGC CATGGATTCT AGCAACTAAC TTACCTGTTG AAATTCGAAC ACCCAAACAA 
CTTGTTAATA TCTATTCGAA GCGAATGCAG ATTGAAGAAA CCTTCCGAGA CTTGAAAAGT 
CCTGCCTACG GACTAGGCCT ACGCCATAGC CGAACGAGCA GCTCAGAGCG TTTTGATATC 
ATGCTGCTAA TCGCCCTGAT GCTTCAACTA ACATGTTGGC TTGCGGGCGT TCATGCTCAG 
AAACAAGGTT GGGACAAGCA CTTCCAGGCT AACACAGTCA GAAATCGAAA CGTACTCTCA 
ACAGTTCGCT TAGGCATGGA AGTTTTGCGG CATTCTGGCT ACACAATAAC AAGGGAAGAC 
TCACTCGTGG CTGCAACCCT GCTTACTCAA AATCTATTCA CACATGGTTA CGTTTTGGGG 
AAATTATGA
 
Protein sequence
MCELDILHDS LYQFCPELHL KRLNSLTLAC HALLDCKTLT LTELGRNLPT KARTKHNIKR 
IDRLLGNRHL HKERLAVYRW HASFICSGNT MPIVLVDWSD IREQKRLMVL RASVALHGRS 
VTLYEKAFPL SEQCSKKAHD QFLADLASIL PSNTTPLIVS DAGFKVPWYK SVEKLGWYWL 
SRVRGKVQYA DLGAENWKPI SNLHDMSSSH SKTLGYKRLT KSNPISCQIL LYKSRSKGRK 
NQRSTRTHCH HPSPKIYSAS AKEPWILATN LPVEIRTPKQ LVNIYSKRMQ IEETFRDLKS 
PAYGLGLRHS RTSSSERFDI MLLIALMLQL TCWLAGVHAQ KQGWDKHFQA NTVRNRNVLS 
TVRLGMEVLR HSGYTITRED SLVAATLLTQ NLFTHGYVLG KL