Gene SeHA_C4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4646 
Symbol 
ID6492160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp4541310 
End bp4542956 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content55% 
IMG OID642744714 
Productfumarate hydratase class I, anaerobic 
Protein accessionYP_002048291 
Protein GI194450164 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA AAGAGTTTAT CTATCAGGCG CCTTTCCCGA TGGGAGAGGA CAAAACAGAG 
TATTATCTGC TCACCTCCGA TTATGTCAGC GTCAGTGAAT TCAATGGAGA ATCTATCCTC 
AACGTTGAGC CGCAGGCGTT AACGTTGCTG GCTCAGCAGG CCTTCCATGA TGCGTCTTTT 
ATGCTCCGTC CTGAACACCA GCAGCAAGTC GCCGCCATTC TCCATGACCC CGAAGCCAGC 
GAAAACGACA AATATGTGGC GTTGCAATTC CTGAGAAACT CCGAAATCGC CGCCAAAGGC 
GTTCTGCCGA CCTGCCAGGA TACCGGCACG GCGATTATCA TGGGTAAAAA AGGCCAACGC 
GTATGGACGG GCGGCGGCGA TGAAGCCGCG CTCTCCAAAG GCGTGTTTAA TACCTATATC 
GAAGATAACC TGCGCTACTC GCAGAACGCG CCGCTGGATA TGTACAAAGA GGTCAATACT 
GGCAGCAACC TGCCAGCGCA AATCGATCTC TATGCCGTCG ATGGCGACGA GTACAAGTTC 
CTTTGCGTGG CGAAAGGCGG CGGTTCAGCA AACAAAACGT ATCTCTATCA GGAGACCAAA 
GCGCTGCTCA CCCCAGGCAA GCTGAAAAAC TTCCTCGTTG AGAAAATGCG CACGCTGGGC 
ACCGCAGCCT GTCCGCCATA CCATATCGCC TTTGTCATTG GCGGCACCTC GGCGGAAAGC 
ACGCTGAAAA CCGTTAAGCT CGCCAGCACC CACTATTACG ACGCGCTGCC GACGGAAGGT 
AACGAGCACG GCCAGGCATT CCGCGATCTC CGCCTGGAAC AGGAACTGCT GGAAGAAGCG 
CAAAAACTTG GCCTCGGCGC CCAGTTCGGC GGGAAATATT TCGCCCACGA TATTCGCGTA 
ATTCGCCTGC CGCGTCACGG CGCTTCCTGT CCGGTGGGGA TGGGCGTCTC CTGCTCGGCA 
GACCGTAACA TCAAAGCGAA AATCAACCGC GAAGGCATCT GGATCGAAAA ACTGGAACAC 
AATCCGGGCC AGTATATTCC GCCAGCGCTG CGTCAGGCGG GCGAAGGCGA CGCGGTGAAA 
GTCGATCTCA ACCGTCCGAT GAAAGAGATC CTCGCCCAGC TATCGCAGTA CCCGGTCTCG 
ACTCGCCTGT CGCTGACGGG CACCATTATC GTAGGTCGCG ATATCGCCCA CGCGAAGCTA 
AAAGAGCGTA TTGAATCCGG CGAAGACCTG CCGCAGTATA TTAAAGACCA TCCCATCTAT 
TACGCAGGCC CGGCCAAAAC CCCGGCAGGT TATCCATCTG GCTCATTAGG CCCCACCACC 
GCAGGCCGAA TGGACTCTTA TGTCGATCTA CTGCAATCCC ACGGCGGCAG TATGATCATG 
CTGGCGAAAG GCAACCGTAG CCAGCAGGTC ACGGATGCCT GTAAAAAACA TGGCGGCTTT 
TATTTGGGCA GTATCGGCGG CCCGGCGGCG GTACTGGCAC AGCAGAGCAT TAAGCATCTG 
GAGTGCGTCG AGTATCCGGA ACTCGGCATG GAAGCTATCT GGAAAATTGA AGTAGAAGAT 
TTCCCGGCCT TTATCCTGGT GGATGACAAA GGCAACGATT TCTTCCAGCA GATTGTCAGC 
AAACAGTGCG CTAACTGCGC GAAATAA
 
Protein sequence
MSKKEFIYQA PFPMGEDKTE YYLLTSDYVS VSEFNGESIL NVEPQALTLL AQQAFHDASF 
MLRPEHQQQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG VLPTCQDTGT AIIMGKKGQR 
VWTGGGDEAA LSKGVFNTYI EDNLRYSQNA PLDMYKEVNT GSNLPAQIDL YAVDGDEYKF 
LCVAKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSAES 
TLKTVKLAST HYYDALPTEG NEHGQAFRDL RLEQELLEEA QKLGLGAQFG GKYFAHDIRV 
IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH NPGQYIPPAL RQAGEGDAVK 
VDLNRPMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KERIESGEDL PQYIKDHPIY 
YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACKKHGGF 
YLGSIGGPAA VLAQQSIKHL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIVS 
KQCANCAK