| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4624 |
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| Symbol | ccmF |
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| ID | 6489698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 4515782 |
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| End bp | 4517518 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642744694 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_002048271 |
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| Protein GI | 194449081 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.240321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.653846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATAATC TGGACATCTT CCTTCCTGAA GCCGGATTTC TGGCGCTGTT GTTGAGTCTC
GGGGTCAACG TATTGACCCC GCTGGCGACG TGGTGCGGGA TGGCGCAGCA TTGGCGTGGC
GTCATGCGCC TGACGACCTG CGGCGCGTGG ACGGCGTTCA CGCTGCTGCT ACTGGCGTTT
GCGATTCTGG TTAGCTGTTT TCTGACCAGC GATTTTTCGG TCGTTTATGT TGCGCAGCAT
AGCCATAGTC AGTTGTCATG GGGACTGAAA CTGGCGGCGG TATGGGGCGG TCATGAAGGC
TCGCTCCTGC TGTGGGCGCT GCTTCTTTCG GGGTGGACGG CGCTATTCGC CTGGCGCTCC
CGGCATGAAT CTGACGCGCT TTTTCCGCTG ACCCTGAGCG TCTTGTCCCT CATTATGGCT
TCGCTGCTGC TATTTATTGT GCTGTGGTCC GATCCGTTCC TGCGTATTTT CCCTCCCGCC
ATGGAAGGGC GCGACCTTAA TCCCATGCTG CAACATCTGG GGCTGATCTT ACATCCGCCG
CTGCTCTATC TGGGTTATGG CGGCCTGATG ACCGCGGCGA GCGTAGCGCT GGCCTCGCTA
CTGTGCGGCG GCTTTAACGC GGCAACCGCC TGGGTGTGCT GGCGCTGGGC GTTACCCGGC
TGGTGCGCTC TGACGCTGGG GATCATTCTC GGATCGTGGT GGGCGTATTG CGAACTGGGC
TGGGGCGGCT GGTGGTTCTG GGACCCGGTG GAAAATGCCT CATTGTTGCC GTGGCTTGCC
GCCAGCGCGT TGCTGCACAG TCTGTATGTC AGCCGCCAGC GCGGGGGCTT CCGTCACTGG
TCGTTGCTGC TGGCGATACT GACGCTGATC CTCTCGTTGC TGGGAACGCT GATTGTGCGT
TCCGGCATTC TGCTTTCCGT CCATGCTTTT GCGCTGGATA ACGTGCGCGC GGTGCCGCTG
TTTACCCTTT TTGCCGCGTT AAGTCTGGCA TCGCTTGCTC TGTACGGCTG GCAGGCGCGG
GAGCCGTATC CGGCGACGCG TTTGGGCGGC GGAAAGCGCG AAACGCTCAT TCTGGCGACG
CTGCTGCTCT TTAGCGCCGT CTTGTTGATC GTGCTGGTCG GGACGCTCTA CCCCATGATT
TATGGTTTGA TGGGCTGGGG AAGGCTTTCG GTGGGCGCGC CCTATTTTAA TCGCGTCACG
CTGCCGTTTG GCCTGCTGAT GCTGGTAGTT ATCGTGCTGG CGACAATCAG AAGCCGCAAA
GTCTCTGTGC ATCGTCAGCT TCCGGCATTG CTGGCGCATA CGGGCGTATT TATCTTCGCC
GCCGGGATTA TGGTTTCCAG CGGCAGTCGG CATGAAATCA GCCTTAACCT CAGCCCCGGT
CAGCAGGTGG TACTGGCGGG CTACATTTTC CGCTTTGAGC GCCTGGATCT GGAGGCCAAA
GGCAACTACA CCAGTGAAAA AGCGCGGATC ACGTTGTGGC GGAATGAAAA ACGCATTGGC
AGCCTGCAGC CTGAAAGGCG CTTCTATGCC GCGCGTCGTC AACAGATGAT GGAGCCGGGG
ATTCACTGGA ACCTGCTACA TGACTGGTAC GCAGTGATGG GCGAAAAAAC CGGACCGGAT
CGTTACGCCA TGCGCTTATA CGTGCAGACC GGCGTGCGCT GGATCTGGGG TGGGGGATTG
TTGATGGTGT GTGGCGCGCT GCTGAGCGGA TGGCGGGGGA GGAAGCGTGA TGCGTAA
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| Protein sequence | MHNLDIFLPE AGFLALLLSL GVNVLTPLAT WCGMAQHWRG VMRLTTCGAW TAFTLLLLAF
AILVSCFLTS DFSVVYVAQH SHSQLSWGLK LAAVWGGHEG SLLLWALLLS GWTALFAWRS
RHESDALFPL TLSVLSLIMA SLLLFIVLWS DPFLRIFPPA MEGRDLNPML QHLGLILHPP
LLYLGYGGLM TAASVALASL LCGGFNAATA WVCWRWALPG WCALTLGIIL GSWWAYCELG
WGGWWFWDPV ENASLLPWLA ASALLHSLYV SRQRGGFRHW SLLLAILTLI LSLLGTLIVR
SGILLSVHAF ALDNVRAVPL FTLFAALSLA SLALYGWQAR EPYPATRLGG GKRETLILAT
LLLFSAVLLI VLVGTLYPMI YGLMGWGRLS VGAPYFNRVT LPFGLLMLVV IVLATIRSRK
VSVHRQLPAL LAHTGVFIFA AGIMVSSGSR HEISLNLSPG QQVVLAGYIF RFERLDLEAK
GNYTSEKARI TLWRNEKRIG SLQPERRFYA ARRQQMMEPG IHWNLLHDWY AVMGEKTGPD
RYAMRLYVQT GVRWIWGGGL LMVCGALLSG WRGRKRDA
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